Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10m05
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.1  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 356 LHEVFGLNLDDYL*VTEY*KRF 291
           L+E+F +  D+Y  +TE  +RF
Sbjct: 70  LNELFDVTRDNYRHITELKRRF 91


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 371 YILRILHEVFGLNLDDYL*VTEY*KRF 291
           Y L  L+E F +  D+Y  VT+  KRF
Sbjct: 70  YKLTPLNEQFDVIKDNYRKVTDLKKRF 96


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/32 (18%), Positives = 17/32 (53%)
 Frame = +2

Query: 272 VYQEMIENVFNIQLLTSNHLDSSQIPRVICEE 367
           +YQ ++    +  +    H+D   + +++CE+
Sbjct: 80  IYQTLLSGKNHPHIQLPKHVDQYLLEQLVCEQ 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,836
Number of Sequences: 336
Number of extensions: 2820
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)