Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m05
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26027| Best HMM Match : DUF164 (HMM E-Value=0.1) 36 0.039
SB_20234| Best HMM Match : zf-AD (HMM E-Value=2) 35 0.052
SB_7507| Best HMM Match : LIM (HMM E-Value=1.9) 35 0.068
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 34 0.12
SB_46910| Best HMM Match : DUF963 (HMM E-Value=3.3) 34 0.12
SB_33966| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_59222| Best HMM Match : Filament (HMM E-Value=0.95) 33 0.16
SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_28850| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14) 30 1.9
SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16) 29 2.6
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 29 2.6
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_44597| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_21606| Best HMM Match : IL17 (HMM E-Value=2.3) 28 5.9
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042) 28 7.9
SB_30574| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 28 7.9
SB_7766| Best HMM Match : zf-AD (HMM E-Value=1.5) 28 7.9
>SB_26027| Best HMM Match : DUF164 (HMM E-Value=0.1)
Length = 715
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/86 (20%), Positives = 46/86 (53%)
Frame = +2
Query: 377 RLRDAAALKQTVLQSQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVEIFPD 556
R+++ Q ++ E+LL + ++++ NKN L ++ + +K E+ ++DN +E D
Sbjct: 91 RIQEDLKHYQQQTETLESLLATENHNNENLMNKNLLLKAELNKLKYELKVKDNKIESLQD 150
Query: 557 DNFDEDHVESNIKAEASRLDDVTDIT 634
+ ++ ++ ++ E + T+ T
Sbjct: 151 ELERMENEKTELRVELRGAEKSTEAT 176
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/90 (18%), Positives = 48/90 (53%)
Frame = +2
Query: 377 RLRDAAALKQTVLQSQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVEIFPD 556
R+++ Q ++ E+LL + ++++ N+N L ++ + +K E+ ++DN +E D
Sbjct: 504 RIQEDLKHYQQQTETLESLLAAVNHNNENLMNENFLLKAELNKLKYELKVKDNKIESLQD 563
Query: 557 DNFDEDHVESNIKAEASRLDDVTDITSQLI 646
+ ++ ++ ++ E + T+ T ++
Sbjct: 564 ELERMENEKTELRVELRGAERSTEATKGMM 593
>SB_20234| Best HMM Match : zf-AD (HMM E-Value=2)
Length = 147
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 338 SQIPRVICEECIRRLRDAAALKQTVLQSQEALLRFAQNLSQDIQNKNTLEES 493
S IPR IC+ C R++ D+ ++ VL +AL F N S+DI ++ + +
Sbjct: 77 SAIPRRICKTCKRKI-DSFVKREKVLNEDKALNGFFYNSSRDISTEDAVSNA 127
>SB_7507| Best HMM Match : LIM (HMM E-Value=1.9)
Length = 200
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 338 SQIPRVICEECIRRLRDAAALKQTVLQSQEALLRFAQNLSQDIQNKNTLEESLM 499
S IPR IC+ C R++ D+ ++ +L AL F N S+DI ++ + + +
Sbjct: 98 SAIPRRICKTCKRKI-DSFVKREKILNEDNALNGFFYNSSRDISTEDAVSNAAL 150
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +2
Query: 401 KQTVLQSQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVE--IFPDDNFD-- 568
+++VLQ++E+L+ + + + ++ TLE+ + +I TE+ E+ L+ + + F+
Sbjct: 858 EESVLQTEESLI-----IKESVVSEQTLEDDTVVEISTEVLQEETLLSAAVIEESTFEVQ 912
Query: 569 EDHVESNIKAEASRLDDVTDITSQLIKQNYVG 664
E +E I E + D +++ Q I + +G
Sbjct: 913 ETQLEEQIVKEI-QADVCEEVSVQEIHEETIG 943
>SB_46910| Best HMM Match : DUF963 (HMM E-Value=3.3)
Length = 984
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +2
Query: 401 KQTVLQSQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVE--IFPDDNFD-- 568
+++VLQ++E+L+ + + + ++ TLE+ + +I TE+ E+ L+ + + F+
Sbjct: 858 EESVLQTEESLI-----IKESVVSEQTLEDDTVVEISTEVLQEETLLSAAVIEESTFEVQ 912
Query: 569 EDHVESNIKAEASRLDDVTDITSQLIKQNYVG 664
E +E I E + D +++ Q I + +G
Sbjct: 913 ETQLEEQIVKEI-QADVCEEVSVQEIHEETIG 943
>SB_33966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/77 (19%), Positives = 44/77 (57%)
Frame = +2
Query: 416 QSQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVEIFPDDNFDEDHVESNIK 595
++ E+LL + ++++ N+N L ++ + +K E+ ++DN +E D+ ++ ++ ++
Sbjct: 99 ETLESLLATVNHNNENLMNENLLLKAELNKLKYELKVKDNKIESLQDELERMENEKTELR 158
Query: 596 AEASRLDDVTDITSQLI 646
E + T+ T+ ++
Sbjct: 159 VELRGAERSTEATNGMM 175
>SB_59222| Best HMM Match : Filament (HMM E-Value=0.95)
Length = 411
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +2
Query: 416 QSQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVEIFPDDNFDEDHVESNIK 595
+ + L +++I+N N+ E L + I I E + + + DH+ S IK
Sbjct: 44 EEENGLYELLNRKAEEIENLNSQVEELESKIAETIFSESSTRNELENSREEVDHLRSEIK 103
Query: 596 AEASRLDDVTDITSQ 640
++ LD T++ Q
Sbjct: 104 SKQELLDAKTELLEQ 118
>SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +2
Query: 242 TEYSTNDSREVYQEMIENVFNIQLLTSNHLDSSQIPRVICEECIRRLR-DAAALKQTVLQ 418
TE S + + Q+ ++ LL S H R + E+ ++ + + A LKQ +++
Sbjct: 490 TESSFLEKMQTLQQTMQEEREKDLLNSTH------HRSMLEDSLKNTKSEEARLKQKLVE 543
Query: 419 SQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEI-SMEDNLVEI 547
++E +LR +NLS + Q++ + E ++ E+ SM D V +
Sbjct: 544 AEEEILRLEKNLS-EAQDRLSASEMTRDRLEKELDSMSDLSVRL 586
>SB_28850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = +2
Query: 440 FAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVEIFPDDNFDEDHVESNIKAEASRLDD 619
FAQ ++ + +KN D+ + +S ED+ + +D+ D+D + + +S +D
Sbjct: 231 FAQQANKSLIDKNVRAIPEFADVTSSLSSEDSFTNVSGNDDDDDD---NTTLSSSSTDED 287
Query: 620 VTDITSQLIKQ 652
+ I+ + K+
Sbjct: 288 LKQISENIAKE 298
>SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14)
Length = 388
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/77 (16%), Positives = 41/77 (53%)
Frame = +2
Query: 416 QSQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVEIFPDDNFDEDHVESNIK 595
++ E+L + ++++ N+N L ++ + ++ E+ +DN +E D+ ++ ++ ++
Sbjct: 128 ETLESLFAAVNHNNENLINENLLLQAELDNLNNELKAKDNRIESLQDELERMENEKTELR 187
Query: 596 AEASRLDDVTDITSQLI 646
E + T+ T ++
Sbjct: 188 VELRGAEKSTEATKGMM 204
>SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16)
Length = 558
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/77 (16%), Positives = 41/77 (53%)
Frame = +2
Query: 416 QSQEALLRFAQNLSQDIQNKNTLEESLMTDIKTEISMEDNLVEIFPDDNFDEDHVESNIK 595
++ E+L + ++++ N+N L ++ + ++ E+ +DN +E D+ ++ ++ ++
Sbjct: 118 ETLESLFAAVNHNNENLINENLLLQAELDNLNNELKAKDNKIESLQDELERMENEKTELR 177
Query: 596 AEASRLDDVTDITSQLI 646
E + T+ T ++
Sbjct: 178 VELRGAERSTEATKGMM 194
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/169 (18%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Frame = +2
Query: 170 LIQEKNISGLCRFCLKNNGSKDIKTEYSTNDSREVYQEMIENVFNIQLLTSNHLDSSQIP 349
L Q N G LK + S + R QE + ++ + + L + +
Sbjct: 1484 LQQNLNKMGTVEKNLKEHSSASEHRNIALEAERTGSQERLNDLISQNDKLNLALKALENE 1543
Query: 350 RVICEECIRRLRDAAALKQTVLQSQEALLRFAQNLSQ------DIQNKNTLEESLMTDIK 511
+ E+ ++ L++ + K+ + +E+L RF++++S+ D++ K + + L+ ++K
Sbjct: 1544 KNEIEQELQALKNNSD-KKKIDGEEESLDRFSESISKLRQAEHDLEEKLEVFQGLLDNVK 1602
Query: 512 TEISMEDNLVEIFPDDNFDEDHVESNIKAEASRLDDVTDITSQLIKQNY 658
+EI + V+ D ++D + ++E V + ++ +Q +
Sbjct: 1603 SEIRQSNKEVDTSSDCTPEKDEYQERTESELELKGKVKVLLEKVEQQEF 1651
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +2
Query: 239 KTEYSTNDSREVYQEMIENVFNIQLLTSNHLDSSQIPRVICEECIRRLRDAAALKQTVLQ 418
+ E TN+ +++ +E+ + + L + D Q + + + I +A L ++ L
Sbjct: 454 RMESKTNEMKKIVKELRAKLSEKETLAN---DLEQKLKALEDRSITEKSEAVLLFESKLA 510
Query: 419 SQEALLR-FAQNLSQDIQNKNTLEESLMTDIKTEISMEDN 535
+ + Q +SQ + LEES +DI+T S DN
Sbjct: 511 TLNKTIEDLTQEVSQKDKQLKALEESKESDIRTLSSDYDN 550
>SB_44597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 449 NLSQDIQNKNTLEESLMTDIKTEISMEDNLVEIFPDDNFDEDHVESNIKAEASRLDDVTD 628
++ DI + N +E D+ + ++ED +I DDN ED+ + ++ + S ++DV D
Sbjct: 63 DVDDDIDDDNNIE-----DVYDDSNIEDVYDDIVDDDNNIEDYYDDSVD-DDSNIEDVYD 116
>SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +2
Query: 434 LRFAQNLSQDIQNKNTL-EESLMTD---IKTEI-SMEDNLVEIFPDDNFDEDHVE 583
L+F +S+++ N+ EE + D I+T+ S+ D+L E DDN D+D+ E
Sbjct: 512 LQFVIEISENVDNRTVQREEKCLLDTGTIRTDPESILDHLKETIIDDNDDDDYDE 566
>SB_21606| Best HMM Match : IL17 (HMM E-Value=2.3)
Length = 129
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 320 SNHLDSSQIPRVI----CEECIRRLRDAAALKQTVLQSQEALLRFAQNLSQD 463
+N +DSS+IPRVI C +C R R + + + +A + + ++ D
Sbjct: 67 TNDIDSSRIPRVIQKAECSDCARHCRPVYYKHKVLFKRCDAAIGYRVHMWMD 118
>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
Length = 1558
Score = 27.9 bits (59), Expect = 7.9
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Frame = +2
Query: 290 ENVFNIQLLTSNHLDSSQIPRVICEECIRRLRDAAALKQTVLQSQEALLRFAQNLSQDIQ 469
+N F + +L S++ P E +RRLR+ K T QS ++ R +
Sbjct: 1411 KNAFLTRAKLKEYLASARAPGDKEEFTMRRLRELRGDKNTEQQSTQSRAR----TKATVH 1466
Query: 470 NKNTLEESLMTDIKTEI-SMEDNLVEIFPDDNFDEDHVESNIKAEASRLDD-VTDITSQL 643
+ L E +T +++ I +M L +I + D +H S + A+ D+ V I QL
Sbjct: 1467 SPKQLLERQITRLESRIDTMNAELTQIMKSE-ADLNHTLSEMDADEEVTDERVAAIREQL 1525
>SB_30574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 221 NGSKDIKTEYSTNDSREVYQEMIENVFNIQLLTSN 325
N S D KT STND +E + + ++ IQ TSN
Sbjct: 186 NHSADPKTPRSTNDLKEKFLQNLKCTNTIQNTTSN 220
>SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1644
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 389 AAALKQTVLQSQEALLRFAQNLS-QDIQNKNTLEESLMTDIKTEIS 523
AA + V+ S E L FA+ + +D +N+N +++DIK++++
Sbjct: 1146 AARQLRQVINSDEFCLGFARLVKHEDYENQNETRPDILSDIKSKLA 1191
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +2
Query: 200 CRFCLKNNGSKDIKTEYSTNDSREVYQEMIENVFNIQLLTSNHLDSSQIPRVICEECIRR 379
CR C K +G + TND E + I ++ I + N L P +C C
Sbjct: 16 CRICGKYSGRSSSNRFWKTND--EFVKSKIYQIYGINIEKDNQLIH---PEQVCHTCYSH 70
Query: 380 L 382
L
Sbjct: 71 L 71
>SB_7766| Best HMM Match : zf-AD (HMM E-Value=1.5)
Length = 75
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +2
Query: 200 CRFCLKNNGSKDIKTEYSTNDSREVYQEMIENVFNIQLLTSNHLDSSQIPRVICEECIRR 379
CR C K +G + TND E + I ++ I + N L P +C C
Sbjct: 16 CRICGKYSGRSSSNRFWKTND--EFVKSKIYQIYGINIEKDNQLIH---PEQVCHTCYSH 70
Query: 380 L 382
L
Sbjct: 71 L 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,930,015
Number of Sequences: 59808
Number of extensions: 308542
Number of successful extensions: 986
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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