Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10m04
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    28   0.31 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   6.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   6.6  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   8.8  

>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = -3

Query: 465 WQQHHPHSHSRYRQ--AQLLGTRPRH 394
           WQ HH H  S Y Q   QLL T   H
Sbjct: 299 WQHHHSHHRSAYVQNRVQLLETNTAH 324


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 447 HSHSRYRQAQLLGTRP 400
           + H  Y Q QLLGT P
Sbjct: 10  YRHELYEQQQLLGTSP 25


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 71  CVRFYFRV*VCCKPMCWPYW 130
           C + +FR  VCC     P+W
Sbjct: 34  CQKLHFRDQVCCVQRSPPHW 53


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -3

Query: 462 QQHHPHSHSRYRQ-AQLLGTRPRH 394
           QQHH H H   +Q  Q   + P H
Sbjct: 309 QQHHHHQHQPQQQHQQQYHSHPHH 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,890
Number of Sequences: 2352
Number of extensions: 10315
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)