Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10m02
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z75526-5|CAA99771.1| 209|Caenorhabditis elegans Hypothetical pr... 30 1.3
U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna syn... 28 6.9
AL021447-1|CAA16269.1| 144|Caenorhabditis elegans Hypothetical ... 28 6.9
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 27 9.1
AC006733-3|AAF60488.2| 372|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical
protein F47G4.3 protein.
Length = 374
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = +3
Query: 198 KFPEENYTSYIASSYVKDIEASGARVVPILIGKDRSYYKELMKKINGVLIPGGATFFNQS 377
KF E Y S + +Y + + + G++R + +K + + QS
Sbjct: 263 KFVEHFYPSSVGHTYFESCGVADL-ITTCYGGRNRKVAEAFIKSDKPLRVIEQELLKGQS 321
Query: 378 NGYADAGQHIYELAIELNDVGDYFPIFGT 464
Q +YE+ +E+N++ + FPIF +
Sbjct: 322 AQGPPTAQDVYEM-LEINEISEKFPIFAS 349
>Z75526-5|CAA99771.1| 209|Caenorhabditis elegans Hypothetical
protein C06H2.5 protein.
Length = 209
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 243 HTKKQCSLCSSLQGIFHGGKTIVLEKVHRL*VCHLRPSTHCC 118
HTK C L SL H IVL K + H+ + CC
Sbjct: 94 HTKLLCELLDSLMTDLHQPAKIVLAKCQDVGAAHVNMNEKCC 135
>U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna
synthetase protein 2 protein.
Length = 968
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 354 GATFFNQSNGYADAGQHIYELAI--ELNDVGDYFPIFGTCLGFELLVILASGRG 509
GA +++N YA+ G IY++ + ++ND + F + + +V++ S G
Sbjct: 529 GAILLDRTNFYAEQGGQIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGSAEG 582
>AL021447-1|CAA16269.1| 144|Caenorhabditis elegans Hypothetical
protein F19B2.5 protein.
Length = 144
Score = 27.9 bits (59), Expect = 6.9
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Frame = +3
Query: 42 TVITMKSALLLLWLYVFHCEGAVIVDSNEYSVVN-DRPIIGVLSQEQSFY---LHGKFPE 209
T T+K+ + L E +I D+ Y + N D L Q + Y L G +
Sbjct: 19 TFDTIKTLMNFQTLQKISFERIIIYDA--YPIDNTDTQRYKALRQLDATYRWVLTGNLLQ 76
Query: 210 ENYTSYIASSYVKDIEASGARVVPILIGKDRSYYKELMKKINGVL 344
+N +++ D + ++ PIL GK EL KKI +L
Sbjct: 77 QNLANFLKLGEYGDDQLWDTQICPILEGKQCDEKTELSKKIENLL 121
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
C48B4.4c protein.
Length = 1704
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 3 FIRWLSFSGDDWLTVITMKSALLLLWLYVFHCEGAVIVDSNEYSVV 140
F+ ++ F+ D+WL I + + LL Y F G+ I+ N Y ++
Sbjct: 1251 FLIFMIFNIDEWLKSILVNIFMFLLPSYAF---GSAIITINTYGMI 1293
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
C48B4.4b protein.
Length = 1691
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 3 FIRWLSFSGDDWLTVITMKSALLLLWLYVFHCEGAVIVDSNEYSVV 140
F+ ++ F+ D+WL I + + LL Y F G+ I+ N Y ++
Sbjct: 1238 FLIFMIFNIDEWLKSILVNIFMFLLPSYAF---GSAIITINTYGMI 1280
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
C48B4.4a protein.
Length = 1689
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 3 FIRWLSFSGDDWLTVITMKSALLLLWLYVFHCEGAVIVDSNEYSVV 140
F+ ++ F+ D+WL I + + LL Y F G+ I+ N Y ++
Sbjct: 1236 FLIFMIFNIDEWLKSILVNIFMFLLPSYAF---GSAIITINTYGMI 1278
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 3 FIRWLSFSGDDWLTVITMKSALLLLWLYVFHCEGAVIVDSNEYSVV 140
F+ ++ F+ D+WL I + + LL Y F G+ I+ N Y ++
Sbjct: 1251 FLIFMIFNIDEWLKSILVNIFMFLLPSYAF---GSAIITINTYGMI 1293
>AC006733-3|AAF60488.2| 372|Caenorhabditis elegans Hypothetical
protein Y32H12A.1 protein.
Length = 372
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 163 YFLKNNRFTSMENSLKRTTQATLLLRMSKTLR 258
YFL N LKRTT + LRM TLR
Sbjct: 248 YFLAYCFRHKQNNDLKRTTMSMTTLRMHSTLR 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,693,522
Number of Sequences: 27780
Number of extensions: 339339
Number of successful extensions: 908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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