Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l23
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   5.4  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   9.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 126  FNKKLSNY*INTNKLLS*FRTRFVVR 49
            F +    Y  NTNK+ S +RT F  R
Sbjct: 2430 FRRYRLEYVKNTNKISSVYRTNFAAR 2455


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 126  FNKKLSNY*INTNKLLS*FRTRFVVR 49
            F +    Y  NTNK+ S +RT F  R
Sbjct: 2431 FRRYRLEYVKNTNKISSVYRTNFAAR 2456


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = +1

Query: 223 CTNIKVFDGDTLPKQFCYDCTIKIESAYTF 312
           C N+K+F+GD       + C     +++ +
Sbjct: 705 CRNLKLFEGDPYDNATTFTCVSNCPASHPY 734


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/40 (22%), Positives = 16/40 (40%)
 Frame = +1

Query: 142 LCRSCMKEVASWERENFDPKAVEMFCFCTNIKVFDGDTLP 261
           +CR+C + +  W+        V   CF    +   G  +P
Sbjct: 335 ICRTCPRTIDLWKHFVHADGTVRFECFQPGPRKVSGSIMP 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,672
Number of Sequences: 2352
Number of extensions: 9111
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)