Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l23
         (575 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g23970.1 68418.m02817 transferase family protein similar to  ...    28   3.9  
At4g12760.1 68417.m02003 expressed protein  ; expression support...    27   6.8  
At3g62390.1 68416.m07008 expressed protein several hypothetical ...    27   9.0  

>At5g23970.1 68418.m02817 transferase family protein similar to
           acetyl CoA: benzylalcohol acetyltransferase; BEAT
           [Clarkia breweri][GI:3170250][PMID:9628024],
           deacetylvindoline 4-O-acetyltransferase [Catharanthus
           roseus][GI:4091808][PMID:9681034]
          Length = 428

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/33 (39%), Positives = 25/33 (75%)
 Frame = +1

Query: 391 DLKNTEGLESRLTLPECKISSTIENYSDIILNA 489
           D K++EG+E+R+TLPE  ++   E+ S++++ A
Sbjct: 389 DSKDSEGVEARVTLPETDMAK-YEHDSELLVYA 420


>At4g12760.1 68417.m02003 expressed protein  ; expression supported
           by MPSS
          Length = 227

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 400 NTEGLESRLTLPECKISSTIENYSDIILNALDYVHLNESE 519
           N+E  ES++  P CK    +EN+  I  N  D + LN+ E
Sbjct: 135 NSEQEESQIWCPICKKGELMENHRHIDCNMCD-MQLNKGE 173


>At3g62390.1 68416.m07008 expressed protein several hypothetical
           proteins - Arabidopsis thaliana
          Length = 475

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 124 KMDLSLLCRSCMKEVASWERENFDPKAVEMF 216
           K+D+S   +  ++  +SW  +N DPK   +F
Sbjct: 333 KLDVSTAFKKALQTWSSWVDKNVDPKKTRVF 363


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,406,689
Number of Sequences: 28952
Number of extensions: 185670
Number of successful extensions: 434
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)