Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l19
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.75 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.9  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 10/48 (20%), Positives = 24/48 (50%)
 Frame = -1

Query: 325 PQVNLTSPPSSVFNVTVYNTFSELALGELVTSNFHSTSITLGKTLTIL 182
           P + L S P+ ++N+ +     ++   ++  +  +  SIT G  L+ +
Sbjct: 348 PLLTLNSVPTEIYNLEIQRFIQQIGNSDIAITGKNFFSITRGLILSFV 395


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 352 YTRSCSS*VPQVNLTSPPSSVFNVTVYN 269
           YT+ CSS  P   L +  +S  NV   N
Sbjct: 43  YTKDCSSPTPSDKLNTSTTSSVNVNDQN 70


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -1

Query: 325 PQVNLTSPPSSVFNVTVYNTFSELALGELVTSNFHSTSITLGKTLTI 185
           P + L S  + V+N+ +     ++   E+  +  +  SIT G  L+I
Sbjct: 350 PMLVLNSVSADVYNLEIQRFIHQIGTLEVAFTGKNFFSITRGLILSI 396


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -1

Query: 325 PQVNLTSPPSSVFNVTVYNTFSELALGELVTSNFHSTSITLGKTLTI 185
           P + L S  + V+N+ +     ++   E+  +  +  SIT G  L+I
Sbjct: 350 PMLVLNSVSADVYNLEIQRFIHQIGTLEVAFTGKNFFSITRGLILSI 396


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/53 (20%), Positives = 24/53 (45%)
 Frame = +3

Query: 414 VGVLTLLICACAIVQLIFNKLFCKYITFFINLKRSFYCRNELLISRIRHWRIC 572
           +GV+ + +        +FNKL  +Y    + +K +     +L+    R  ++C
Sbjct: 109 LGVMVVTVDLHVFFFTLFNKLLGQYPVGIVGVKNASLFIFDLIFLSFRCTKLC 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,053
Number of Sequences: 336
Number of extensions: 3181
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)