Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l19
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49830-2|AAV58878.1|  324|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z83218-7|CAB05685.2|  283|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z70207-2|CAA94130.2|  635|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AJ512338-1|CAD54511.1|  635|Caenorhabditis elegans trehalase pro...    28   5.3  
AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death ab...    28   5.3  
Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>U49830-2|AAV58878.1|  324|Caenorhabditis elegans Hypothetical
           protein C33F10.4b protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
 Frame = +3

Query: 186 IVKVLPNVIDVEWKLEVTSSPNASSENVLYTVTLKTDDGGDVRFTCGTQELQDLVYKLKD 365
           + K + NV +V+    V   P+ SS+N+L   +   D       T GT+  + L +  + 
Sbjct: 222 VFKSILNVPNVQEDHIVMCIPSTSSDNILVKASCAKDGTSYHTLTIGTESSRSLTFLAEQ 281

Query: 366 LVRH--CERTKCELS*EKVGVLTLLICACAIVQLIFNKLFCKY 488
           L  H   E +K +    K G+L L       V+ +F  +   +
Sbjct: 282 LRLHLIVEMSKLKSRPAK-GILILTEMDALSVEELFQTMLAAF 323


>Z83218-7|CAB05685.2|  283|Caenorhabditis elegans Hypothetical
           protein C31A11.3 protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
 Frame = -1

Query: 496 NVIYLQNNLLKISCTIAQAHINNVSTPTFSQESSHFVLSQCLT-KSF---NLYTRSCSS* 329
           NVI    + + + C+  Q +I   S        ++ VL   +  + F   N +++  S  
Sbjct: 149 NVIETPKDCVNLQCSTNQCYITYWSFHERITYLANIVLCTVVVFRMFIWNNYFSKQTSKT 208

Query: 328 VPQVNLTSPPSSVFNVTVYNTFSELALGELVTSNFHST-SIT-LGKTLTIL*EAI 170
           + +    +   +VF +TV+NTF    L ++ + NF +  S T + KTL ++ EA+
Sbjct: 209 ISRATRIALFDTVF-ITVFNTFPAFILVKVASLNFKAAGSFTYVTKTLGLMVEAL 262


>Z70207-2|CAA94130.2|  635|Caenorhabditis elegans Hypothetical
           protein F15A2.2 protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -2

Query: 672 VSNIYCVYKLIISTWYY*IEKSCSFVLLNITI*HISAN 559
           +S IYC   ++ ++W + ++K+C    L +T   + AN
Sbjct: 53  LSEIYCHGPILTNSWQFGLQKTCPGDKLKVTAKEVLAN 90


>AJ512338-1|CAD54511.1|  635|Caenorhabditis elegans trehalase
           protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -2

Query: 672 VSNIYCVYKLIISTWYY*IEKSCSFVLLNITI*HISAN 559
           +S IYC   ++ ++W + ++K+C    L +T   + AN
Sbjct: 53  LSEIYCHGPILTNSWQFGLQKTCPGDKLKVTAKEVLAN 90


>AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death
           abnormality protein 8 protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 453 LLHKHILIMLVHPLFLKKVHI 391
           L+  H+L+ LVH +FL+ +HI
Sbjct: 292 LISVHLLVTLVHVIFLQAIHI 312


>Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/18 (50%), Positives = 16/18 (88%)
 Frame = +1

Query: 454 YSLFLINYFVSISRFSLI 507
           Y+ ++ N+F+S++RFSLI
Sbjct: 108 YAQYIYNFFISLNRFSLI 125


>Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/18 (50%), Positives = 16/18 (88%)
 Frame = +1

Query: 454 YSLFLINYFVSISRFSLI 507
           Y+ ++ N+F+S++RFSLI
Sbjct: 108 YAQYIYNFFISLNRFSLI 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,466,049
Number of Sequences: 27780
Number of extensions: 283215
Number of successful extensions: 702
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)