Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l15
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   0.99 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.2  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +1

Query: 214 LSLVLVQCTVN---YIFAQILMLSWKHEKDNTKKIYYFSSALTYLLGMVCSNMALQWVN 381
           LS +++   +N   +I  Q+    + H+    + +YYF S    +L +V       W+N
Sbjct: 285 LSYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLVSVCFYGSWIN 343


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
 Frame = +1

Query: 109  IFYAGSIFTCYFIYGMLQEKVTRGVYG--NNEKFTATLSLVLVQCTVNYIFAQILMLSWK 282
            +F+AG I     IYG++   V  GV    + +   A  SL        +I A +L     
Sbjct: 943  LFFAGLISA---IYGLIMMAVFVGVMLQISQDGPLAPSSLFFFCMAAEFIIAALL----- 994

Query: 283  HEKD-NTKK---IYYFSSALTYLLGMVCSNMALQWVNYPTQVVGKAAKPIP 423
            H ++ N  K   IYY +    YLL ++ S   +  V++ T+ V    KP P
Sbjct: 995  HPQEFNCLKYGVIYYVTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPKPDP 1045


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
 Frame = +1

Query: 109  IFYAGSIFTCYFIYGMLQEKVTRGVYG--NNEKFTATLSLVLVQCTVNYIFAQILMLSWK 282
            +F+AG I     IYG++   V  GV    + +   A  SL        +I A +L     
Sbjct: 943  LFFAGLISA---IYGLIMMAVFVGVMLQISQDGPLAPSSLFFFCMAAEFIIAALL----- 994

Query: 283  HEKD-NTKK---IYYFSSALTYLLGMVCSNMALQWVNYPTQVVGKAAKPIP 423
            H ++ N  K   IYY +    YLL ++ S   +  V++ T+ V    KP P
Sbjct: 995  HPQEFNCLKYGVIYYVTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPKPDP 1045


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 396 CGKSGKTHPSPDARCPSWSQVISS 467
           CG  G  H  P+    S +Q ISS
Sbjct: 660 CGSMGDAHTPPEDDAESLNQSISS 683


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 396 CGKSGKTHPSPDARCPSWSQVISS 467
           CG  G  H  P+    S +Q ISS
Sbjct: 552 CGSMGDAHTPPEDDAESLNQSISS 575


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 148 YGMLQEKVTRGVYGNNE 198
           Y  LQEK T   Y NN+
Sbjct: 24  YNFLQEKTTYEYYENNQ 40


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 420 PSPDARCPSWSQVISSEEIPVCISYCYWC 506
           P P   CP      + EE  +C  + Y+C
Sbjct: 101 PQPSQHCPRKHGYFAHEEPHICDKF-YYC 128


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 148 YGMLQEKVTRGVYGNNE 198
           Y  LQEK T   Y NN+
Sbjct: 15  YNFLQEKTTYEYYENNQ 31


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 388 TQVVGKAAKPIPVLMLGVLLGRKSY 462
           T++  KA K IPV++    L +K Y
Sbjct: 408 TRLYKKAGKEIPVILWTSTLTQKEY 432


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 450 SQVISSEEIPVCISYCYWCCAIHVQRPK 533
           SQ I    +P+ + YC  C  + +Q+ +
Sbjct: 47  SQWIPDLGVPIGVLYCMKCECVPLQKKR 74


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/44 (22%), Positives = 19/44 (43%)
 Frame = -2

Query: 605 PSMRSDNIKSSSPIPMPGVSSVTLFWSLYMNSTTPITIRNTNRY 474
           PS+   ++  SSP     ++S T+      N+  P   R +  +
Sbjct: 241 PSVMYPHLNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHF 284


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/44 (22%), Positives = 19/44 (43%)
 Frame = -2

Query: 605 PSMRSDNIKSSSPIPMPGVSSVTLFWSLYMNSTTPITIRNTNRY 474
           PS+   ++  SSP     ++S T+      N+  P   R +  +
Sbjct: 189 PSVMYPHLNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHF 232


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/44 (22%), Positives = 19/44 (43%)
 Frame = -2

Query: 605 PSMRSDNIKSSSPIPMPGVSSVTLFWSLYMNSTTPITIRNTNRY 474
           PS+   ++  SSP     ++S T+      N+  P   R +  +
Sbjct: 372 PSVMYPHLNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHF 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,113
Number of Sequences: 336
Number of extensions: 3736
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)