BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10l12 (510 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 54 7e-08 At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 54 7e-08 At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 48 4e-06 At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 46 1e-05 At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 46 1e-05 At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 46 2e-05 At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 44 5e-05 At3g43960.1 68416.m04706 cysteine proteinase, putative contains ... 43 1e-04 At2g27420.1 68415.m03314 cysteine proteinase, putative contains ... 43 1e-04 At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p... 42 2e-04 At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol pro... 41 4e-04 At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP pr... 40 7e-04 At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 38 0.003 At4g16190.1 68417.m02457 cysteine proteinase, putative contains ... 37 0.009 At3g45310.1 68416.m04892 cysteine proteinase, putative similar t... 36 0.012 At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 36 0.016 At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG1... 34 0.064 At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 33 0.15 At3g48340.1 68416.m05276 cysteine proteinase, putative similar t... 31 0.45 At5g66210.2 68418.m08341 calcium-dependent protein kinase family... 30 0.79 At5g66210.1 68418.m08340 calcium-dependent protein kinase family... 30 0.79 At2g35650.1 68415.m04372 glycosyl transferase family 2 protein s... 29 1.8 At3g60290.1 68416.m06739 oxidoreductase, 2OG-Fe(II) oxygenase fa... 28 3.2 At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containi... 28 3.2 At3g48350.1 68416.m05277 cysteine proteinase, putative similar t... 28 4.2 At1g19770.1 68414.m02471 purine permease-related low similarity ... 27 5.5 At4g10790.1 68417.m01759 UBX domain-containing protein low simil... 27 7.3 At1g76780.1 68414.m08935 expressed protein ; expression supporte... 27 7.3 At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 27 9.7 At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 27 9.7 At2g47860.2 68415.m05974 phototropic-responsive NPH3 family prot... 27 9.7 At2g47860.1 68415.m05973 phototropic-responsive NPH3 family prot... 27 9.7 >At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1) identical to papain-type cysteine endopeptidase XCP1 GI:6708181 from [Arabidopsis thaliana] Length = 288 Score = 53.6 bits (123), Expect = 7e-08 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Frame = +1 Query: 88 ALLIATVVMASSAETDTPRHY-DLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLA 264 ALL S TP H + ++ ELFE ++ EH++ YK ++ ++ F+++L Sbjct: 21 ALLCCAFARDFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLM 80 Query: 265 EINQLNEKNPYTTFGINKFADYTPEEQQSR-LGLRLP 372 I+Q N + G+N+FAD T EE + R LGL P Sbjct: 81 HIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKP 117 >At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1) identical to papain-type cysteine endopeptidase XCP1 GI:6708181 from [Arabidopsis thaliana] Length = 355 Score = 53.6 bits (123), Expect = 7e-08 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Frame = +1 Query: 88 ALLIATVVMASSAETDTPRHY-DLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLA 264 ALL S TP H + ++ ELFE ++ EH++ YK ++ ++ F+++L Sbjct: 21 ALLCCAFARDFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLM 80 Query: 265 EINQLNEKNPYTTFGINKFADYTPEEQQSR-LGLRLP 372 I+Q N + G+N+FAD T EE + R LGL P Sbjct: 81 HIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKP 117 >At4g23520.1 68417.m03390 cysteine proteinase, putative contains similarity to cysteine proteinase (thiol protease) RD21A GI:435619, SP:P43297 from [Arabidopsis thaliana] Length = 356 Score = 48.0 bits (109), Expect = 4e-06 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%) Frame = +1 Query: 91 LLIATVVMASSAETDTPR----HYDLNQAKE-LFEIFVKEHNREYKDD-ADRELHYQSFK 252 LLI V+ A S+ D P H N+ E +F++++ +H + Y + ++E +Q+FK Sbjct: 14 LLIVFVLSAPSSAMDLPATSGGHNRSNEEVEFIFQMWMSKHGKTYTNALGEKERRFQNFK 73 Query: 253 KHLAEINQLNEKNPYTTFGINKFADYTPEE 342 +L I+Q N KN G+ +FAD T +E Sbjct: 74 DNLRFIDQHNAKNLSYQLGLTRFADLTVQE 103 >At2g34080.1 68415.m04172 cysteine proteinase, putative contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas] Length = 345 Score = 46.4 bits (105), Expect = 1e-05 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Frame = +1 Query: 70 MNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSF 249 M V+V +++ T S A + T + + + E ++ +REY+D+ ++ + F Sbjct: 5 MVLVTVLIILFTGFRISQATSRTVIFREQSMVDK-HEQWMARFSREYRDELEKNMRRDVF 63 Query: 250 KKHLAEINQLNEK-NPYTTFGINKFADYTPEE 342 KK+L I N+K N G+N+FAD+T EE Sbjct: 64 KKNLKFIENFNKKGNKSYKLGVNEFADWTNEE 95 >At1g29110.1 68414.m03563 cysteine proteinase, putative contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas] Length = 334 Score = 46.0 bits (104), Expect = 1e-05 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 6/103 (5%) Frame = +1 Query: 79 VSV-ALLIATVVMASSAETDTPR-HYDLNQAK--ELFEIFVKEHNREYKDDADRELHYQS 246 VSV ++ +A +++ R H LN+ + + ++ + +R YKD++++E+ + Sbjct: 2 VSVRSVFVALTILSMDLRISQARPHVTLNEQSIVDYHQQWMTQFSRVYKDESEKEMRLKV 61 Query: 247 FKKHLAEINQLNEK-NPYTTFGINKFADYTPEE-QQSRLGLRL 369 FKK+L I N N T G+N+F D+ EE + GLR+ Sbjct: 62 FKKNLKFIENFNNMGNQSYTLGVNEFTDWKTEEFLATHTGLRV 104 >At1g29090.1 68414.m03561 peptidase C1A papain family protein contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas]; contains Pfam profile PF00112: Papain family cysteine protease Length = 355 Score = 45.6 bits (103), Expect = 2e-05 Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 1/90 (1%) Frame = +1 Query: 76 FVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSFKK 255 F+ V+L I ++ + S T ++ A E + ++ +R Y D+ ++++ + FKK Sbjct: 15 FMLVSLTILSMNLKVSQATSRVTFHEPIVA-EHHQQWMTRFSRVYSDELEKQMRFDVFKK 73 Query: 256 HLAEINQLNEKNPYT-TFGINKFADYTPEE 342 +L I + N+K T G+N+FAD+T EE Sbjct: 74 NLKFIEKFNKKGDRTYKLGVNEFADWTREE 103 >At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2) identical to papain-type cysteine endopeptidase XCP2 GI:6708183 from [Arabidopsis thaliana] Length = 356 Score = 44.4 bits (100), Expect = 5e-05 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Frame = +1 Query: 169 ELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEE-Q 345 ELFE ++ + Y+ ++ L ++ FK +L I++ N+K G+N+FAD + EE + Sbjct: 49 ELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFK 108 Query: 346 QSRLGLR 366 + LGL+ Sbjct: 109 KMYLGLK 115 >At3g43960.1 68416.m04706 cysteine proteinase, putative contains similarity to cysteine proteinase RD21A (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana] Length = 376 Score = 43.2 bits (97), Expect = 1e-04 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%) Frame = +1 Query: 70 MNFVSVALLIATVVMAS---SAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHY 240 ++F ++ALL +V++ S T T + + ++E ++ E+ + Y ++E + Sbjct: 3 ISFRTLALLTLSVLLISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRF 62 Query: 241 QSFKKHLAEINQLN-EKNPYTTFGINKFADYTPEE-QQSRLGLRLPAK 378 + FK +L I + N + N G+NKF+D T +E Q S LG ++ K Sbjct: 63 KIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKK 110 >At2g27420.1 68415.m03314 cysteine proteinase, putative contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas] Length = 348 Score = 43.2 bits (97), Expect = 1e-04 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 3/111 (2%) Frame = +1 Query: 82 SVALLIATVVMASSAETDTPRHYDLN-QAKELFEIFVKEHNREYKDDADRELHYQSFKKH 258 S + I T+ ++ T R A E E ++ NR Y D+ ++ + FKK+ Sbjct: 3 STIIFILTIFLSYRTSLATSRGSLFEASAIEKHEQWMARFNRVYSDETEKRNRFNIFKKN 62 Query: 259 LAEINQLNEKNPYT-TFGINKFADYTPEE-QQSRLGLRLPAKKT*VLRLQS 405 L + N N T IN+F+D T EE + + GL +P T + L S Sbjct: 63 LEFVQNFNMNNKITYKVDINEFSDLTDEEFRATHTGLVVPEAITRISTLSS 113 >At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol protease, putative similar to cysteine proteinase RD21A precursor (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana] Length = 463 Score = 42.3 bits (95), Expect = 2e-04 Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 5/124 (4%) Frame = +1 Query: 25 LGTSKPVPLLIHCAKMNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNR 204 +G K P+++ A + VS A+ ++ + + T ++ + ++E ++ EH + Sbjct: 1 MGFLKLSPMILLLAMIG-VSYAMDMSIISYDENHHITTETSRSDSEVERIYEAWMVEHGK 59 Query: 205 EYKDD----ADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR-LGLRL 369 + + A+++ ++ FK +L I++ N KN G+ +FAD T EE +S LG + Sbjct: 60 KKMNQNGLGAEKDQRFEIFKDNLRFIDEHNTKNLSYKLGLTRFADLTNEEYRSMYLGAK- 118 Query: 370 PAKK 381 P K+ Sbjct: 119 PTKR 122 >At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol protease identical to SP|P43297 Cysteine proteinase RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana}, thiol protease RD21A SP:P43297 from [Arabidopsis thaliana] Length = 462 Score = 41.1 bits (92), Expect = 4e-04 Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 3/121 (2%) Frame = +1 Query: 25 LGTSKPVPLLIHCAKMNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNR 204 +G KP ++ A M VS A+ ++ + T + ++E ++ +H + Sbjct: 1 MGFLKPTMAILFLA-MVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGK 59 Query: 205 EYKDDA--DRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR-LGLRLPA 375 ++ +++ ++ FK +L +++ NEKN G+ +FAD T +E +S+ LG ++ Sbjct: 60 AQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEK 119 Query: 376 K 378 K Sbjct: 120 K 120 >At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP protein (AALP) identical to AALP protein GI:7230640 from [Arabidopsis thaliana]; similar to barley aleurain Length = 358 Score = 40.3 bits (90), Expect = 7e-04 Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = +1 Query: 175 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEE-QQS 351 F F + ++Y++ + +L + FK++L I N+K G+N+FAD T +E Q++ Sbjct: 59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRT 118 Query: 352 RLG 360 +LG Sbjct: 119 KLG 121 >At1g29080.1 68414.m03560 peptidase C1A papain family protein contains similarity to cysteine protease SPCP1 GI:13491750 from [Ipomoea batatas]; contains Pfam profile PF00112: Papain family cysteine protease Length = 346 Score = 38.3 bits (85), Expect = 0.003 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Frame = +1 Query: 70 MNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSF 249 + FV V L I + + S T Y + + + ++ + +R Y D+ +++L Q Sbjct: 4 VEFVCVVLTIFFMDLKISEATSRVALYKPSSIVDYHQQWMIQFSRVYDDEFEKQLRLQVL 63 Query: 250 KKHLAEINQLNEK-NPYTTFGINKFADYTPEE 342 ++L I N N G+N+F D+T EE Sbjct: 64 TENLKFIESFNNMGNQSYKLGVNEFTDWTKEE 95 >At4g16190.1 68417.m02457 cysteine proteinase, putative contains similarity to papain-like cysteine proteinase isoform I GI:7381219 from [Ipomoea batatas] Length = 373 Score = 36.7 bits (81), Expect = 0.009 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +1 Query: 154 LNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYT 333 L A+ F +F ++ + Y + + ++ FK +L + +P G+ +F+D T Sbjct: 48 LLNAEHHFTLFKSKYEKTYATQVEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLT 107 Query: 334 PEE-QQSRLGLR 366 P+E ++ LGL+ Sbjct: 108 PKEFRRKFLGLK 119 >At3g45310.1 68416.m04892 cysteine proteinase, putative similar to AALP protein GI:7230640 from [Arabidopsis thaliana] and barley aleurain Length = 358 Score = 36.3 bits (80), Expect = 0.012 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +1 Query: 175 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEE-QQS 351 F F + ++Y+ + +L + FK++L I N+K +N+FAD T +E Q+ Sbjct: 59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRY 118 Query: 352 RLG 360 +LG Sbjct: 119 KLG 121 >At4g11320.1 68417.m01828 cysteine proteinase, putative contains similarity to cysteine proteinase RD21A (thiol protease) GI:435619, SP:P43297 from [Arabidopsis thaliana] Length = 371 Score = 35.9 bits (79), Expect = 0.016 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +1 Query: 160 QAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPE 339 +A +FE ++ +H + Y A++E F+ +L I N +N G+N+FAD + Sbjct: 51 EATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLH 110 Query: 340 E 342 E Sbjct: 111 E 111 >At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG12) / cysteine proteinase, putative identical to senescence-specific protein SAG12 GI:1046373 from [Arabidopsis thaliana] Length = 346 Score = 33.9 bits (74), Expect = 0.064 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = +1 Query: 184 FVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTF--GINKFADYTPEEQQS 351 ++ +H R Y D + Y FK ++ I LN TF +N+FAD T +E +S Sbjct: 41 WMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFRS 98 >At5g50260.1 68418.m06224 cysteine proteinase, putative similar to cysteine endopeptidase precursor CysEP GI:2944446 from [Ricinus communis] Length = 361 Score = 32.7 bits (71), Expect = 0.15 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = +1 Query: 157 NQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTP 336 N EL+E + + H+ + ++ + FK ++ I++ N+K+ +NKF D T Sbjct: 32 NSLWELYERW-RSHHTVARSLEEKAKRFNVFKHNVKHIHETNKKDKSYKLKLNKFGDMTS 90 Query: 337 EE 342 EE Sbjct: 91 EE 92 >At3g48340.1 68416.m05276 cysteine proteinase, putative similar to cysteine endopeptidase precursor [Ricinus communis] GI:2944446; contains Pfam profile PF00112: Papain family cysteine protease Length = 351 Score = 31.1 bits (67), Expect = 0.45 Identities = 14/51 (27%), Positives = 26/51 (50%) Frame = +1 Query: 190 KEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEE 342 + H+ + +RE + F+ ++ ++ N+KN +NKFAD T E Sbjct: 42 RSHHSVPRSLNEREKRFNVFRHNVMHVHNTNKKNRSYKLKLNKFADLTINE 92 >At5g66210.2 68418.m08341 calcium-dependent protein kinase family protein / CDPK family protein contains Pfam domains, PF00069: Protein kinase domain and PF00036: EF hand Length = 523 Score = 30.3 bits (65), Expect = 0.79 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 Query: 232 LHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLGLR 366 LH ++H +E QL + + F ++K TPEE + GLR Sbjct: 432 LHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLR 476 >At5g66210.1 68418.m08340 calcium-dependent protein kinase family protein / CDPK family protein contains Pfam domains, PF00069: Protein kinase domain and PF00036: EF hand Length = 523 Score = 30.3 bits (65), Expect = 0.79 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 Query: 232 LHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLGLR 366 LH ++H +E QL + + F ++K TPEE + GLR Sbjct: 432 LHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLR 476 >At2g35650.1 68415.m04372 glycosyl transferase family 2 protein similar to beta-(1-3)-glucosyl transferase GB:AAC62210 GI:3687658 from [Bradyrhizobium japonicum], cellulose synthase from Agrobacterium tumeficiens [gi:710492] and Agrobacterium radiobacter [gi:710493]; contains Pfam glycosyl transferase, group 2 family protein domain PF00535; identical to cDNA for partial mRNA for glycosyltransferase (cslA07 gene) GI:28551963 Length = 556 Score = 29.1 bits (62), Expect = 1.8 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = -1 Query: 396 SQNLCLLSRQPQSQPALLFLRSIISKFVNAKRSIWILLVQLVYLCQVFLE*LIMQLSVGI 217 S L LS+ S+ ++ FL + S+ + A+ +W L++ V + VF +++ L + + Sbjct: 16 SSFLLSLSQAGSSKTSVAFLNAFKSEDIIARIGLWWQLIRAVVVVPVFKFLVLLCLVMSV 75 Query: 216 ILVFPVMF 193 + VM+ Sbjct: 76 MFFVEVMY 83 >At3g60290.1 68416.m06739 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to flavonol synthase 1 [SP|Q96330], gibberellin 20-oxidase [GI:9791186]; contains PF03171 2OG-Fe(II) oxygenase superfamily domain Length = 316 Score = 28.3 bits (60), Expect = 3.2 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +1 Query: 199 NREYKDDADRELHYQSFKKHLAEINQL-NEKNP--YTTFGINKFADY 330 N++YK + LH K ++ QL NE P Y F N F DY Sbjct: 250 NKDYKRLSFASLHSLPMHKKISPATQLVNENKPAAYGEFSFNDFLDY 296 >At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containing protein and genefinder Length = 559 Score = 28.3 bits (60), Expect = 3.2 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -2 Query: 428 FVWNSIPID*SRRTYVFLAGSLNPNLLCCSSGV*SANLLMPNV 300 FVWN+I SR ++ +A S+ ++LC S V L P+V Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132 >At3g48350.1 68416.m05277 cysteine proteinase, putative similar to cysteine endopeptidase precursor [Ricinus communis] GI:2944446; contains Pfam profile PF00112: Papain family cysteine protease Length = 364 Score = 27.9 bits (59), Expect = 4.2 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 238 YQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQS 351 + F+ ++ +++ N+KN IN+FAD T E +S Sbjct: 58 FNVFRHNVLHVHRTNKKNKPYKLKINRFADITHHEFRS 95 >At1g19770.1 68414.m02471 purine permease-related low similarity to purine permease [Arabidopsis thaliana] GI:7620007; contains Pfam profile PF03151: Domain of unknown function, DUF250 Length = 393 Score = 27.5 bits (58), Expect = 5.5 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Frame = -1 Query: 294 WILLVQLVYLCQVFLE*LIMQLSVGIILVFPVMFF---DENFEQFFG--LIEVIMS 142 W+ +V LVY L +I ++ I+ V V+FF D+ F+ F G L+ ++S Sbjct: 322 WVGIVGLVYSVSSVLSNVISVITWPIVSVLVVIFFNFMDDEFDAFKGVALVTAVLS 377 >At4g10790.1 68417.m01759 UBX domain-containing protein low similarity to SP|Q9UNN5 FAS-associated factor 1 (FAF1 protein) {Homo sapiens}; contains Pfam profile PF00789: UBX domain Length = 480 Score = 27.1 bits (57), Expect = 7.3 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = -3 Query: 442 HNTFISFGIAFR*TEVAELMSS*QAASIPTCSAVPQEYNQQI 317 + F+S+G + R +E ++ +S +A+ P C+ V NQ+I Sbjct: 234 NENFVSWGGSIRSSEGFKMSNSLKASRFPFCAVVMPAANQRI 275 >At1g76780.1 68414.m08935 expressed protein ; expression supported by MPSS Length = 1871 Score = 27.1 bits (57), Expect = 7.3 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 5/47 (10%) Frame = +1 Query: 166 KELFE---IFVKEHNREYKDDADR-ELHYQSFKKHLAEIN-QLNEKN 291 KEL E I+ EH + KDDA+R E + K+ L +N QL ++N Sbjct: 768 KELVENRGIYRNEHEEKKKDDANRPEKITGTIKQELVSLNSQLRQEN 814 >At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 405 Score = 26.6 bits (56), Expect = 9.7 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +1 Query: 199 NREYKDDADRELHYQS 246 N E+KD+ +R LHY+S Sbjct: 10 NMEFKDEEERNLHYKS 25 >At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 404 Score = 26.6 bits (56), Expect = 9.7 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +1 Query: 199 NREYKDDADRELHYQS 246 N E+KD+ +R LHY+S Sbjct: 10 NMEFKDEEERNLHYKS 25 >At2g47860.2 68415.m05974 phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000 Length = 517 Score = 26.6 bits (56), Expect = 9.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +1 Query: 148 YDLNQAKELFEIFVKEHNREYKDDADRE 231 YD + + +F +F+ EY+DD D E Sbjct: 221 YDTDSVQRIFSMFLNLDECEYRDDDDDE 248 >At2g47860.1 68415.m05973 phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000 Length = 635 Score = 26.6 bits (56), Expect = 9.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +1 Query: 148 YDLNQAKELFEIFVKEHNREYKDDADRE 231 YD + + +F +F+ EY+DD D E Sbjct: 339 YDTDSVQRIFSMFLNLDECEYRDDDDDE 366 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,779,846 Number of Sequences: 28952 Number of extensions: 181020 Number of successful extensions: 514 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 511 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 917929344 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -