Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l11
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.65 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.6  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   6.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.1  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 206 SVAVTMHRLVERRHPVEILRAEEFSIHQTKWS 111
           SV V+M+  +   HP     A E S  Q +WS
Sbjct: 148 SVNVSMNMTMHGYHPSSSYPANEISCPQVQWS 179


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 279 QIENVMKPIEQ-LTSAMNQMALQEMGSKITSND 374
           ++ENV       +T+ +N M L E+  K+T ND
Sbjct: 120 EVENVEDLFTSGITTGVNFMKLDEIEVKVTGND 152


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 37  EFYKTN**RTNKKRCQFCHTC 99
           E+Y  N  RT KKR + C  C
Sbjct: 155 EYYWPNMYRTIKKRLRSCDLC 175


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 355 LKSHPTTRSFRSISTYNIF 411
           ++SHP    ++   TYN+F
Sbjct: 192 VESHPNITWYQQCVTYNVF 210


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 355 LKSHPTTRSFRSISTYNIF 411
           ++SHP    ++   TYN+F
Sbjct: 192 VESHPNITWYQQCVTYNVF 210


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +2

Query: 113 TISSDGSRTLRPAGFLQDVAFQ--PIDAS 193
           T+ SD     RP G+L  VA    P DA+
Sbjct: 155 TLLSDLKEAFRPGGYLLTVAVAAIPTDAA 183


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 147 PQDFYRMSP 173
           P DFYR SP
Sbjct: 218 PSDFYRFSP 226


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 147 PQDFYRMSP 173
           P DFYR SP
Sbjct: 110 PSDFYRFSP 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,828
Number of Sequences: 336
Number of extensions: 2612
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)