Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10l11
(607 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 34 0.076
03_02_0485 - 8808139-8808618 33 0.13
03_02_0484 + 8805053-8805538 33 0.13
03_02_0483 - 8804021-8804485 33 0.13
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 33 0.13
01_01_0229 - 1943473-1943922 33 0.13
01_01_0231 + 1951047-1951499 33 0.23
01_01_0227 + 1933247-1933699 32 0.41
05_07_0287 + 28993615-28995617,28996464-28996524,28996603-28996830 31 0.94
11_02_0041 - 7669692-7670312 29 2.9
05_07_0248 - 28651807-28651908,28652001-28652061,28652164-286522... 29 2.9
05_04_0240 + 19325981-19326260,19327135-19327156,19327361-193274... 29 2.9
04_04_0939 - 29530242-29531087,29531406-29531597,29531690-295317... 29 2.9
08_01_0863 + 8437188-8437337,8437649-8437739,8437913-8438002,843... 29 3.8
04_04_0947 - 29583775-29583931,29584030-29584256 29 3.8
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 29 3.8
10_08_0919 + 21564245-21565699,21566876-21567022,21567170-215672... 27 8.7
07_03_0681 + 20659789-20659839,20660030-20660170,20661294-206613... 27 8.7
04_03_0757 + 19316949-19317892,19318403-19318430,19318932-19319042 27 8.7
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 27 8.7
02_05_0494 + 29486960-29487454 27 8.7
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 34.3 bits (75), Expect = 0.076
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 281 NRKRNETDRAADFGDESNGASGDGL*NHIQRREVSG-QYRRTTFFTG*NKC 430
+R+RN DR + + +NG S DGL + ++R +++G + RTT + C
Sbjct: 148 SRQRNIEDRLRERDEAANGGSSDGLQDRMERSKIAGVRLNRTTTSSSSEPC 198
>03_02_0485 - 8808139-8808618
Length = 159
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
S +F+RR+ LP+ P+ +++ + +GVLTVT P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVP 143
>03_02_0484 + 8805053-8805538
Length = 161
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
S +F+RR+ LP+ P+ +++ + +GVLTVT P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVP 145
>03_02_0483 - 8804021-8804485
Length = 154
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
S +F+RR+ LP+ P+ +++ + +GVLTVT P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVP 138
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
S QF+RR+ LP+ D V++ L +GVLTVT P
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVP 134
>01_01_0229 - 1943473-1943922
Length = 149
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
S QF+RR+ LP+ D V++ + +GVLTVT P
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVP 133
>01_01_0231 + 1951047-1951499
Length = 150
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
S QF+RR+ LP+ D V++ + +GVLTVT P
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVP 134
>01_01_0227 + 1933247-1933699
Length = 150
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
S +F RR+ LP+G D V + + +GVLTVT P
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVP 134
>05_07_0287 + 28993615-28995617,28996464-28996524,28996603-28996830
Length = 763
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 177 NQSMHRDRYRMSPYNQFRDVFEPQFYRPWENT 272
++SMHRDRY P +FR E R WEN+
Sbjct: 117 HRSMHRDRYERQPSGRFRQWPE----RQWENS 144
>11_02_0041 - 7669692-7670312
Length = 206
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 507 QFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
+F RR+ +P G V ++L DGVLTVT P
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP 171
>05_07_0248 -
28651807-28651908,28652001-28652061,28652164-28652270,
28652369-28652473,28652556-28652642,28652814-28652894,
28653083-28653155,28653243-28653355,28653439-28653532,
28653633-28653688,28653779-28653865,28653975-28654064,
28654178-28654348,28654752-28654871,28654981-28655193
Length = 519
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 142 SARRISTGCRLSTN--RCIVTATECLRTINFATSLNRSFTDPGKI 270
+ RR+ G R + N +C++T+ T++ TS R+F DP ++
Sbjct: 43 AVRRMCLGYRGTKNGAQCVLTSDAGPDTLHVRTSFRRNFADPNEV 87
>05_04_0240 +
19325981-19326260,19327135-19327156,19327361-19327484,
19327721-19327811,19327984-19328073,19328450-19328550,
19328702-19328866
Length = 290
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 257 SVKLRFKDVAKLIVRRHSVAVTMHRLVERRHPVEILRAEEFSI 129
+V+L + + +V H VT+H + E + P+EIL E +I
Sbjct: 176 AVELSKTEETQAVVISHPSLVTVHDMTEVKRPIEILGGERDTI 218
>04_04_0939 -
29530242-29531087,29531406-29531597,29531690-29531770,
29532300-29532428,29532579-29532650,29532761-29532829,
29533809-29533891,29534101-29534203,29534289-29534402,
29536230-29536274
Length = 577
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 61 RTNKKRCQFCHTCTIWRDHFV*WIENSSARR 153
R N K C+ C C DH W+ N R+
Sbjct: 117 RKNSKHCRSCDKCVDGFDHHCRWLNNCVGRK 147
>08_01_0863 +
8437188-8437337,8437649-8437739,8437913-8438002,
8438099-8438202,8439137-8439277
Length = 191
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 257 SVKLRFKDVAKLIVRRHSVAVTMHRLVERRHPVEILRAEEFSIHQTKWSLQIVH 96
+V++ + + IV H AVT + E + P+EIL A+ ++ + Q VH
Sbjct: 84 AVEVAKTNEVEAIVISHPAAVTADDMKEVKWPIEILGAQNDTVTPPRLVYQFVH 137
>04_04_0947 - 29583775-29583931,29584030-29584256
Length = 127
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 222 DCTETFCSGHDASIG*KATSCRNPAGRRVLDPSDE 118
D E SGH AS A S R P GR DP D+
Sbjct: 11 DDIEAGFSGHSASPVKPAASPRRPGGRLFCDPCDD 45
>03_05_0176 +
21546952-21547887,21548856-21548921,21549959-21550877,
21551277-21551449,21551927-21552475
Length = 880
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 191 MHRLVERRHPVEILRAEEFSIHQTKWSL-QIVHVWQN*HR 75
+H+ +RH +E L ++ S HQ + Q H WQ HR
Sbjct: 737 LHKYANKRHSLEELPSDTSSPHQKHHQMSQEKHHWQQKHR 776
>10_08_0919 +
21564245-21565699,21566876-21567022,21567170-21567286,
21567580-21568176
Length = 771
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 177 NQSMHRDRYRMSPYNQFRDVFEPQFYRPWENTLRQIENVMKPI 305
+Q M+ S ++ +VF P+ RPW+++L + + +PI
Sbjct: 615 SQPMNLVERECSQHHGRGEVFAPKHPRPWKHSLANVNWMTRPI 657
>07_03_0681 +
20659789-20659839,20660030-20660170,20661294-20661399,
20661625-20661806,20661888-20662113,20662198-20662624,
20662844-20663189,20663271-20663849
Length = 685
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +3
Query: 198 RYRMSPYNQFRDVFEPQFYRPWENTLRQIENVMKPIEQLTSAMNQMALQEMGSKITSN 371
R M +N +P F R E R V+ I +L + M + E SKITSN
Sbjct: 95 RRAMRRHNHRFRALQPTFRRSIETISRYFAEVLFSIGELRNEMIKPPSSEPHSKITSN 152
>04_03_0757 + 19316949-19317892,19318403-19318430,19318932-19319042
Length = 360
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -2
Query: 321 PKSAARSVSLRFLFVAKYFPRVCKTAVQRRREIDCTETFCSGHDAS 184
P+ A S R + V P A QR+R I C CSG AS
Sbjct: 76 PRRAPPGSSTRGMAVGTRLPAPPTKAQQRQRGIGCGGASCSGGGAS 121
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -3
Query: 254 VKLRFKDVAKLIVRRHSVAVTMHRLVERRHPVEILRAEEFSIHQTKWSLQIVHVWQ 87
V LR +A+L RR V RL++RR + R +EF I+ K S+Q W+
Sbjct: 1002 VFLRAGQMAELDARRAEVLANAARLIQRRIKTHLTR-KEF-INLRKASIQSQKFWR 1055
>02_05_0494 + 29486960-29487454
Length = 164
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 504 RQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
R + ++ LP+ D ++++ DGVLTVT P
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVP 137
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,972,237
Number of Sequences: 37544
Number of extensions: 281847
Number of successful extensions: 787
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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