Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10l11
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 45 4e-05
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 42 5e-04
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 37 0.015
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 36 0.025
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 36 0.025
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 36 0.025
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 36 0.025
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 31 0.72
SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_33418| Best HMM Match : IQ (HMM E-Value=1.6) 28 5.1
SB_43263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_56572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_5300| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_40033| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 336 ALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGY-VSRQF 512
A E + T +D KF + +DV F P+E++ ++HG+ +RQF
Sbjct: 85 ATTENKAPATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQEC--EEHGFFTARQF 142
Query: 513 IRRYALPQGCLPDTVESKLSSDGVLTVTA 599
R + LP+ DT+ +L DGVL + A
Sbjct: 143 NRHFVLPREVDMDTLVPRLGKDGVLYIEA 171
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 375 EKFQV-NIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGCLPD 551
+KFQ+ +DV+ F P+EI + + G+ S++F R Y LP+G
Sbjct: 4 DKFQIATLDVREFKPEEITCKVENGKIKVSGLQRH-ESEEGFDSKEFRRCYNLPEGVDES 62
Query: 552 TVESKLSSDGVLTVTA 599
++ ++++ DG+L V A
Sbjct: 63 SISTRIAEDGMLHVEA 78
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +3
Query: 393 IDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGCLPDTVESKLS 572
+DV+++ P+EI+ + +HGY + +F R Y LP G TV S+++
Sbjct: 45 LDVKNYRPEEISLKVEHGRIKIDGKHKS-EGEHGYETSEFHRSYNLPDGVDVSTVSSRIT 103
Query: 573 SDGVLTVTA 599
DG+L + A
Sbjct: 104 GDGLLHIEA 112
Score = 25.4 bits (53), Expect(2) = 2.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 369 NDEKFQVNIDVQHFSPD 419
+D++F V +DV FSPD
Sbjct: 139 DDKRFTVTLDVSSFSPD 155
Score = 22.6 bits (46), Expect(2) = 2.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 516 RRYALPQGCLPDTVESKLSSDGVLTVTA 599
R + LP+ D++ S+L DG L + A
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEA 188
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 336 ALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHG-YVSRQF 512
A +E S T +D KF + +DV F P+E++ ++HG + +RQF
Sbjct: 13 ATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQEC--EEHGFFTARQF 70
Query: 513 IRRYALPQ 536
R + LPQ
Sbjct: 71 NRHFVLPQ 78
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +3
Query: 351 GSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYAL 530
G+K S D+KF + +DV+ F P+ I + H Y + F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147
Query: 531 PQGCLPDTVESKLSSDGVL 587
P+ D++ ++L +G L
Sbjct: 148 PREVDMDSLTTRLDKEGKL 166
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +3
Query: 321 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 500
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 79 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 137
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVL 587
+ F R++ LP+ D++ ++L +G L
Sbjct: 138 AMHFNRQFVLPREVDMDSLTTRLDKEGKL 166
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +3
Query: 321 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 500
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 313 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 371
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVL 587
+ F R++ LP+ D++ ++L +G L
Sbjct: 372 AMHFNRQFVLPREVDMDSLTTRLDKEGKL 400
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +3
Query: 321 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 500
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 79 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 137
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVL 587
+ F R++ LP+ D++ ++L +G L
Sbjct: 138 AMHFNRQFVLPREVDMDSLTTRLDKEGKL 166
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +3
Query: 321 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 500
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 79 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 137
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVL 587
+ F R++ LP+ D++ ++L +G L
Sbjct: 138 AMHFNRQFVLPREVDMDSLTTRLDKEGKL 166
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +3
Query: 321 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 500
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 79 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 137
Query: 501 SRQFIRRYALPQGCLPDTVESKLSSDGVL 587
+ F R++ LP+ D++ ++L +G L
Sbjct: 138 AMHFNRQFVLPREVDMDSLTTRLDKEGKL 166
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 31.1 bits (67), Expect = 0.72
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 366 SNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGCL 545
+ ++KF + IDV F P+ I + H Y + F R++ LP+
Sbjct: 93 AKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREVD 151
Query: 546 PDTVESKLSSDGVL 587
D++ ++L +G L
Sbjct: 152 MDSLTTRLDKEGKL 165
>SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = -3
Query: 299 FHYVFYLSQSIFPGSVKLRFKDVAKLIVRRHSVAVTMHRL-----VERRHPVEILRAEEF 135
+H+ F+L ++ F +LR +L V H MH L +E ++P++ + E
Sbjct: 432 YHFYFWLCEASFGHRWELRLTTCLELSVIEHIGPQLMHFLKAADELENQYPIQPMDDETL 491
Query: 134 SIHQTKWSLQIV 99
S HQ K +V
Sbjct: 492 SEHQEKVDYTLV 503
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -3
Query: 287 FYLSQSIFPGSVKLRFKDVAKLIVRRHSVAVTMHRLVERRHPVEILR 147
F S +IF S + L++ RH++ + H L+ RH + ILR
Sbjct: 444 FLSSDTIFLSSDTTLLSSDSTLLILRHNLLILRHHLLIFRHNLIILR 490
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -3
Query: 356 RAHLL--KRHLIHRRSQLLDRFHYVFYLSQSIFPGSVKLRFKDVAKLIVRRHSVAVTMHR 183
R HLL + +LI R LL H++ L ++ + LR L++ RH++ + H
Sbjct: 364 RHHLLIFRHNLIILRHNLLILRHHLLILRHNL----IILRHH----LLIFRHNLIILRHN 415
Query: 182 LVERRHPVEILRAEEFSIHQT 120
L+ RH + ILR S +T
Sbjct: 416 LLILRHNLIILRHNFLSSDRT 436
>SB_33418| Best HMM Match : IQ (HMM E-Value=1.6)
Length = 344
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 264 ENTLRQIENVMKPIEQLTSAMNQMALQEM 350
E TL +I+++ K EQL A N+M ++E+
Sbjct: 294 ELTLEEIKSLRKNFEQLIQAQNEMLVREL 322
>SB_43263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 302 RFHYVFYLSQSIFPGSVKLRFKDVAKLIVRRHSV 201
R Y+F++S++ PG+V+L + L V R V
Sbjct: 108 RLEYMFFVSRTAVPGAVELHLLETGTLSVIRSCV 141
>SB_56572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Frame = +3
Query: 483 DQHGYVSRQFIRRYALPQ------GCLPDTVESKLSSDGVLTV 593
++ Y R+F++R++LPQ G L E+ LS D VLT+
Sbjct: 20 EEDAYDLREFVKRFSLPQIVRVLDGFLDLNEENTLSMDQVLTL 62
>SB_5300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +3
Query: 162 RMSPFNQSMHRDRYRMSPYNQFRDVFEPQFYRPWENTLRQIENVMKPIEQLTSAMNQMAL 341
R S ++ RD+ R + R V +P YRP LR+I K E L + L
Sbjct: 9 RKSTGGKAPPRDQGRQKERSIHRRVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL 68
Query: 342 QEMGSKITSNDEKFQ 386
++ D +FQ
Sbjct: 69 VREIAQDFKTDLRFQ 83
>SB_40033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 336 PFDSSPKSAARSVSLRFLFVAKYFPRVCKTA 244
P KSAA++V++ FLFV Y + +TA
Sbjct: 181 PHHKREKSAAKAVAVVFLFVLSYTLSIYRTA 211
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,857,130
Number of Sequences: 59808
Number of extensions: 353352
Number of successful extensions: 1045
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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