Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l11
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    86   1e-18
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    26   1.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 85.8 bits (203), Expect = 1e-18
 Identities = 39/88 (44%), Positives = 53/88 (60%)
 Frame = +3

Query: 339 LQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIR 518
           + + GS +  + +KFQ+N+DVQ FSP+EI+                 QD HGYVSR F+R
Sbjct: 1   MHDSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVR 60

Query: 519 RYALPQGCLPDTVESKLSSDGVLTVTAP 602
           RY LP+G     + S LSSDG+LT+T P
Sbjct: 61  RYMLPKGHNEADIVSSLSSDGILTITCP 88


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 595 VTVRTPSEDSFDSTVSGKQPCGSAYRLMNCL 503
           VTV  P+++  DS+ SG  P  S+   ++CL
Sbjct: 59  VTVPAPAKELTDSSRSGGLPSSSSSSSLSCL 89


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 495 YVSRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAP 602
           Y+S +F     +PQGC+   +   L  + V  V  P
Sbjct: 661 YLSEEFFCTSGVPQGCVLSPLLFSLFINDVCNVLPP 696


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,191
Number of Sequences: 2352
Number of extensions: 10890
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)