Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l11
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.44 
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   4.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   4.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.1  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   7.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.1  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 282 IENVMKPIEQLTSAMNQMALQEMGSKITSNDEKF 383
           +ENV+  +++L    NQ+ LQE         +K+
Sbjct: 372 LENVLAIVDRLMDETNQLTLQETADAFKDLQDKY 405


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 556 TVSGKQPCGSAYRLMNC 506
           ++  + PC  AY+L+ C
Sbjct: 101 SIQNEDPCEKAYQLVKC 117


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 367 PTTRSFRSISTYNIFHRMK*M*R*STDTSWWKGNTRRSRISTG 495
           PTT    S  + +    +K + + +TD S W  +T R RI+ G
Sbjct: 146 PTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFG 188


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 543 LPDTVESKLSSDGVLTVTA 599
           LPD +  K+  DG L +T+
Sbjct: 559 LPDDLRQKVLPDGTLVITS 577


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 543 LPDTVESKLSSDGVLTVTA 599
           LPD +  K+  DG L +T+
Sbjct: 559 LPDDLRQKVLPDGTLVITS 577


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 61 RTNKKRCQFC 90
          R N+ RCQ+C
Sbjct: 65 RINRNRCQYC 74


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 61  RTNKKRCQFC 90
           R N+ RCQ+C
Sbjct: 114 RINRNRCQYC 123


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +2

Query: 83   NFAIRVRFGETISSDGSRTLRPAGFLQDVAFQPI 184
            + +++ + G+T+S  G    +P G +Q  + QPI
Sbjct: 954  SISVKFQEGQTVSGGGMGGCQPGGVVQ--SQQPI 985


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,264
Number of Sequences: 438
Number of extensions: 3071
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)