Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10l10
(556 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VE04 Cluster: 39S ribosomal protein L55, mitochondria... 58 1e-07
UniRef50_Q4PLY9 Cluster: Possible mitochondrial ribosomal protei... 52 7e-06
UniRef50_UPI0000E495B7 Cluster: PREDICTED: similar to ENSANGP000... 51 2e-05
UniRef50_UPI00015B6068 Cluster: PREDICTED: similar to CG14283-PA... 48 1e-04
UniRef50_UPI0001555475 Cluster: PREDICTED: similar to mitochondr... 47 3e-04
UniRef50_Q2KHY3 Cluster: Mitochondrial ribosomal protein L55; n=... 46 6e-04
UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondria... 46 6e-04
UniRef50_UPI0000F1E90B Cluster: PREDICTED: hypothetical protein;... 46 8e-04
UniRef50_UPI0000DB793A Cluster: PREDICTED: similar to mitochondr... 45 0.001
UniRef50_UPI0000F2DD64 Cluster: PREDICTED: hypothetical protein;... 44 0.002
UniRef50_UPI000065E3FA Cluster: 39S ribosomal protein L55, mitoc... 42 0.007
UniRef50_A7RNQ0 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.007
UniRef50_Q5DAI0 Cluster: SJCHGC03170 protein; n=1; Schistosoma j... 41 0.022
UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily prot... 37 0.36
UniRef50_Q7T9S5 Cluster: ORF_90; n=1; Adoxophyes orana granulovi... 33 4.5
UniRef50_A4VES8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q22N97 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
>UniRef50_Q9VE04 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=4; Endopterygota|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 107
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/85 (34%), Positives = 41/85 (48%)
Frame = +3
Query: 192 RYLNNNIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPRXXXXXXXXXXXXXXXXX 371
R +++ +T++HR VY R+Y PT + PDGSTIN+RYHEPR
Sbjct: 14 RCISSATTAVTRLHRSVYCRLY-PTVVVQPDGSTINIRYHEPRKIIKLPLDLSTLTDAER 72
Query: 372 XXXXXXXXXXXXXXITEDLGDSFNA 446
I E++ D+FNA
Sbjct: 73 RARLEARKPRKKVKIMEEVEDNFNA 97
>UniRef50_Q4PLY9 Cluster: Possible mitochondrial ribosomal protein
L55; n=1; Ixodes scapularis|Rep: Possible mitochondrial
ribosomal protein L55 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 119
Score = 52.4 bits (120), Expect = 7e-06
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +3
Query: 201 NNNIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
N+N A I++I R Y R+Y PT + PDGSTINVRYHE R
Sbjct: 28 NSNTASISRIKRATYVRLY-PTALVQPDGSTINVRYHESR 66
>UniRef50_UPI0000E495B7 Cluster: PREDICTED: similar to
ENSANGP00000013649; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000013649
- Strongylocentrotus purpuratus
Length = 123
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +3
Query: 147 LLSNYKGALINSLTKRYLNNNIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPRXX 326
LL+ + + SL N+N A I K +R+VYSRM YPT + DGST ++Y EPR
Sbjct: 14 LLNRFPANISYSLNLVRCNSNRAAIAKTNRKVYSRM-YPTLVVNTDGSTFRIKYGEPRKI 72
Query: 327 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEDLGDSFNA 446
I +DL D+F+A
Sbjct: 73 LKLPVDVNMLAADEKKIRLARYQPKKKVKIEDDLDDNFDA 112
>UniRef50_UPI00015B6068 Cluster: PREDICTED: similar to CG14283-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG14283-PA - Nasonia vitripennis
Length = 122
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 129 IKMICKLLSNYKGALINSLTKRYLNNNIACITKIHREVYSRMYYPTTIALPDGSTINVRY 308
++M K+ + K A + R +N A ITK HREVY + YPT + +GSTIN++Y
Sbjct: 9 MRMASKVSTLLKTAQLAGFASRNINCWTAAITKKHREVYLQT-YPTLLQHSNGSTINIQY 67
Query: 309 HEP 317
EP
Sbjct: 68 QEP 70
>UniRef50_UPI0001555475 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L55; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L55 - Ornithorhynchus anatinus
Length = 541
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +3
Query: 201 NNNIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
N+N A +T++ R VY+R+Y P + DGST+++RY EPR
Sbjct: 216 NSNRAALTRVRRAVYARLY-PVLLVREDGSTVHIRYREPR 254
>UniRef50_Q2KHY3 Cluster: Mitochondrial ribosomal protein L55; n=1;
Bos taurus|Rep: Mitochondrial ribosomal protein L55 -
Bos taurus (Bovine)
Length = 95
Score = 46.0 bits (104), Expect = 6e-04
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +3
Query: 207 NIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
N A +T++HR+ Y+R+Y P + DGSTI++RY EPR
Sbjct: 37 NRASLTRVHRQTYARLY-PILLVKQDGSTIHIRYPEPR 73
>UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=17; Eutheria|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Homo sapiens (Human)
Length = 128
Score = 46.0 bits (104), Expect = 6e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +3
Query: 213 ACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
A +T++HR+ Y+R+Y P + DGSTI++RY EPR
Sbjct: 38 ASLTRVHRQAYARLY-PVLLVKQDGSTIHIRYREPR 72
>UniRef50_UPI0000F1E90B Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 131
Score = 45.6 bits (103), Expect = 8e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 201 NNNIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
++N + ++ R+ Y RMY P + PDGSTIN+RY EPR
Sbjct: 40 DSNRTSVVRLGRQKYERMY-PVLLVRPDGSTINIRYQEPR 78
>UniRef50_UPI0000DB793A Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L55 CG14283-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L55 CG14283-PA - Apis mellifera
Length = 122
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +3
Query: 192 RYLNNNIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
R LN A ITK HR++Y + P + LPDGS+IN+ Y EPR
Sbjct: 34 RNLNCWTAAITKKHRKLYLNTF-PVYLVLPDGSSINIDYEEPR 75
>UniRef50_UPI0000F2DD64 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 306
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 213 ACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
A +T+I RE Y+R+Y P + DGSTI++RY EPR
Sbjct: 218 ASLTRIRRETYARLY-PVMLVKQDGSTIHIRYKEPR 252
>UniRef50_UPI000065E3FA Cluster: 39S ribosomal protein L55,
mitochondrial precursor (L55mt) (MRP-L55).; n=1;
Takifugu rubripes|Rep: 39S ribosomal protein L55,
mitochondrial precursor (L55mt) (MRP-L55). - Takifugu
rubripes
Length = 122
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 201 NNNIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
N+N + + R+ Y R Y P + PDGSTIN++Y EPR
Sbjct: 32 NSNRTSVVRCGRQKYERSY-PVMLVQPDGSTINIQYREPR 70
>UniRef50_A7RNQ0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 144
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 213 ACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
A IT++ ++ Y RMY + PDGST +RYHEPR
Sbjct: 56 ASITRLKKQAYPRMY-KVLVVQPDGSTYTMRYHEPR 90
>UniRef50_Q5DAI0 Cluster: SJCHGC03170 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03170 protein - Schistosoma
japonicum (Blood fluke)
Length = 113
Score = 40.7 bits (91), Expect = 0.022
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 201 NNNIACITKIHREVYSRMYYPTTIALPDGSTINVRYHEPR 320
N N A + +I+R +Y R Y P + P+G I +R+HEPR
Sbjct: 23 NANRAIMCRINRRIYGRTY-PVDLVYPNGGFIRIRFHEPR 61
>UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily
protein, putative; n=4; Mycoplasma|Rep:
Metallo-beta-lactamase superfamily protein, putative -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 688
Score = 36.7 bits (81), Expect = 0.36
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 50 ANFIFYNNITFMITAFYLKKLTLFVNYKNDLQIIV 154
ANFI N ++I A + LT+ +NYKN L+I++
Sbjct: 33 ANFILNFNFNYLILAIFFLSLTIILNYKNTLKILL 67
>UniRef50_Q7T9S5 Cluster: ORF_90; n=1; Adoxophyes orana
granulovirus|Rep: ORF_90 - Adoxophyes orana granulovirus
(AoGV)
Length = 90
Score = 33.1 bits (72), Expect = 4.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 232 WIFVIQAMLLLRYLFVKEFINAPL*FDN 149
W+F+I + L+ YL VK F N+ + +DN
Sbjct: 55 WLFIIVLLFLISYLIVKSFRNSKILYDN 82
>UniRef50_A4VES8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1028
Score = 32.7 bits (71), Expect = 5.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 44 FCANFIFYNNITFMITAFYLKKLTLFVNYKNDLQIIVKL*RRVNK 178
FC FI T +I++ YLK + FVN K ++K+ R + K
Sbjct: 132 FCFFFIIILCYTSVISSLYLKNVNFFVNLKRQPNCLLKVIRLIEK 176
>UniRef50_Q22N97 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 314
Score = 32.3 bits (70), Expect = 7.8
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 47 CANFIFYNNITFMITAFYLKKLTLFVNYKNDLQIIVKL*RRVNKLFN 187
CA ++N+TF++ A + F+N++ D+ + + + VN LFN
Sbjct: 24 CATLTIWSNLTFLLFALF------FINFQRDIPLYLNINLHVNGLFN 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,711,651
Number of Sequences: 1657284
Number of extensions: 6921428
Number of successful extensions: 15598
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15588
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -