Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l10
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.5  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 68  NNITFMITAFYLKKLTLFVNY 130
           N I  M + +Y+ ++TL VNY
Sbjct: 162 NIINDMCSLYYILQITLIVNY 182


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 130 IIYE*CKFFQIECS--YHKCNIIVKNKIC 50
           +IYE    F  +C   YH CN ++   +C
Sbjct: 143 LIYE-AHGFSYKCGIQYHICNTVISATVC 170


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 130 IIYE*CKFFQIECS--YHKCNIIVKNKIC 50
           +IYE    F  +C   YH CN ++   +C
Sbjct: 139 LIYE-AHGFSYKCGIQYHICNTVISATVC 166


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = +3

Query: 237 EVYSRMYYPTTIALPDGSTINVRYH 311
           ++ +R+  PT +++ +    NVR++
Sbjct: 517 DITTRLLLPTVLSMANDKVANVRFN 541


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,297
Number of Sequences: 336
Number of extensions: 2177
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)