Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10l09
(603 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23H4.07c |srp102||signal recognition particle receptor beta ... 59 6e-10
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 58 7e-10
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 55 7e-09
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 45 1e-05
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 39 6e-04
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 29 0.52
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 29 0.52
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 28 0.91
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 28 1.2
SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Ma... 27 2.1
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 27 2.1
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 3.7
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 3.7
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 26 3.7
SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 26 3.7
SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 26 3.7
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 26 3.7
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 25 6.4
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 25 6.4
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 25 6.4
SPAC57A10.12c |ura3||dihydroorotate dehydrogenase Ura3|Schizosac... 25 6.4
SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces pomb... 25 6.4
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 25 8.5
>SPAC23H4.07c |srp102||signal recognition particle receptor beta
subunit Srp102 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 58.8 bits (136), Expect = 6e-10
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Frame = +1
Query: 181 LLSLIVLAVTLIFWWIFSRRYTLRN---SVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMK 351
+++ I++ + IF R T++ +V L+G SDSGKT LF L Y + + T S++
Sbjct: 11 IVATIIIGAIISTLGIFFTRKTIQKKLPAVFLIGPSDSGKTSLFCELIYKEKKTTVPSIE 70
Query: 352 ENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKS--SAKGIVFVIDSINIQKEIRDVAEY 525
N E + +VDLPG R + + + K +VFV++S I +++ +V
Sbjct: 71 PN--EAVWKYGAW-LVDLPGHPRAKRWITTKFSGNYNVKAVVFVLNSATIDRDVHEVGLM 127
Query: 526 LY-TILCDPIIQGNTTPLLILCNKQD 600
L+ TIL + + LLI CNK D
Sbjct: 128 LFDTIL--KCRKHHVPHLLIACNKFD 151
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 58.4 bits (135), Expect = 7e-10
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Frame = +1
Query: 229 FSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDL 405
FSR ++ + +L++GL +GKT + +L +Q T ++ N+E N + D+
Sbjct: 13 FSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDV 72
Query: 406 PGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLIL 585
GQ+++R + + + KG++FV+DS + I + + L+ I+ D + LL+L
Sbjct: 73 GGQDKIR-PLWRHYFTGTKGLIFVVDSAD-SNRISEARQELHRIISDR--EMRDCLLLVL 128
Query: 586 CNKQD 600
NKQD
Sbjct: 129 ANKQD 133
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 55.2 bits (127), Expect = 7e-09
Identities = 36/134 (26%), Positives = 72/134 (53%)
Frame = +1
Query: 199 LAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITS 378
L+++ +F +F +R +L++GL +GKT + +L + T ++ N+E
Sbjct: 3 LSISKLFQSLFGKR---EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYR 59
Query: 379 NKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQ 558
N + + D+ GQ+++R + + + +GI+FV+DS N ++ I + E L +L + ++
Sbjct: 60 NISFTVWDVGGQDKIR-PLWRHYFQNTQGIIFVVDS-NDRERISEAHEELQRMLNEDELR 117
Query: 559 GNTTPLLILCNKQD 600
LL+ NKQD
Sbjct: 118 --DALLLVFANKQD 129
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 44.8 bits (101), Expect = 1e-05
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 438
VLL+GL ++GKT + L + + I I D+ GQ+ LRN F+
Sbjct: 19 VLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTLRN-FW 77
Query: 439 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 600
+ + S + I++V+DS++ + + L +L + + T +L+L NK D
Sbjct: 78 KNYFESTEAIIWVVDSLD-DLRLEECRNTLQELLVEEKLL--FTSILVLANKSD 128
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 38.7 bits (86), Expect = 6e-04
Identities = 28/114 (24%), Positives = 50/114 (43%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 438
+L +GL ++GKT L L + ++ EE N DL G ++ R + +
Sbjct: 23 MLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQAR-RLW 81
Query: 439 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 600
+ GIV+++D + ++ AE + + + + P LIL NK D
Sbjct: 82 RDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELAR---VPFLILGNKID 132
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 29.1 bits (62), Expect = 0.52
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 467 IPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFI 345
+P+A +L C + P RST++N L EV S I SF+
Sbjct: 463 LPIAFILGCLVGILQHYIAP-RSTMYNSLFEVTGSIITSFL 502
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 581 IRRGVVFP*MIG-SHKIVYRYSATSLISFCILIESITNTIPLALL 450
I+ + F + G SH ++ + T+L SFC + ++N PL+LL
Sbjct: 601 IQENIYFGIVAGLSHGPLHGFPLTNLQSFCTISSFLSNDFPLSLL 645
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 28.3 bits (60), Expect = 0.91
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Frame = +1
Query: 241 YTLRN-SVLLMGLSDSGKTLLFVRLAYSQYRQTFTS---MKENIEEYITSNKT--LKIVD 402
++LR ++ +G GKT L R Y Q+ T+ + + + ++T L++ D
Sbjct: 7 FSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 403 LPGQERLRNKFFEQ-HKSSAKGIVFVIDS----INIQKEIRDV-AEYLYTILCDPIIQGN 564
GQER R+ SS IV+ I + +N +K I DV AE ++ ++ GN
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVII--VLVGN 124
Query: 565 TTPL 576
T L
Sbjct: 125 KTDL 128
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.9 bits (59), Expect = 1.2
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 169 RYITLLSLIVLAVTLIFWWIFS 234
+YI ++S+IVL +T + W++F+
Sbjct: 1440 QYINIISIIVLVLTSLAWFLFN 1461
>SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 535
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +1
Query: 427 NKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPL 576
N F +H S KGIVFV D+ ++Q ++D ++L L ++G +PL
Sbjct: 363 NVFAARHLSEVKGIVFV-DAGSVQ-TLKDSGQFLSRFLL--FVRGWLSPL 408
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 256 SVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLP 408
S L G S +GKTLL LA + ++ ++ EY+ + +++ P
Sbjct: 616 SFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKHSVSRLIGAP 666
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 403 LPGQERLRNKFFEQHKSSAKGIVFVIDSI-NIQKEIRDVAEYLYT 534
L + L N FFE+ K+ + ++++DS+ ++ EIR + + T
Sbjct: 440 LAEDQLLLNNFFEELKNKLESDLYLLDSVFDLVPEIRSLLQQFST 484
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 3.7
Identities = 21/94 (22%), Positives = 45/94 (47%)
Frame = +1
Query: 94 KRKNSTMESEVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFWWIFSRRYTLRNSVLLMG 273
+R +ST + + + T P+++ + L S++V A+ I+W+ R S L G
Sbjct: 58 RRFHSTWQKKKHDDLTATVPVIDFRKNQKLTSIVVNAIQAIYWY-------ARRSNCLTG 110
Query: 274 LSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYIT 375
++++ ++ L F S++ I +Y+T
Sbjct: 111 INEA--EYIWKSLIPESIFYHFVSLQSFIRKYLT 142
>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -1
Query: 471 HNSLSTTLVLFKEFISQSLLSRQIN--YFQCF-IRSYILFNIF 352
HNSLST L + S L + IN +F F + + LF IF
Sbjct: 202 HNSLSTNAALSASVVLASRLEKSINVFFFILFAVHWFALFPIF 244
>SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 687
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 503 SFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFI 345
SFC+ + ++T + ALL+ + +L + P I ++L +I +FSF+
Sbjct: 523 SFCVFLVALTRVVSFALLIPIAFDLAI---IP--KVIIAIILIIIQGLVFSFM 570
>SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 3.7
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -1
Query: 525 VFCYISD-FFLYIDRINHKHNSLSTTLVLFKEFISQSLLSRQINYFQCFIRSYILFNIF 352
+F + +D + L + + + + SLSTT+ LFK+ + + LS I+Y +I NIF
Sbjct: 363 IFFFGTDRYSLPLYKTHARRFSLSTTIHLFKKIV-RITLSTFISYTWIPFLLFIFLNIF 420
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 26.2 bits (55), Expect = 3.7
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 199 LAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMK 351
L + L F +FS+ R+ VLL G +GKTLL +A ++ F S+K
Sbjct: 671 LQLPLQFPELFSQGLKPRSGVLLYGPPGTGKTLLAKAVA-TELSLEFVSIK 720
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLF--VRLAYS 321
VLL+G DSGKT + +RL YS
Sbjct: 77 VLLLGAGDSGKTTIMKQMRLLYS 99
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 25.4 bits (53), Expect = 6.4
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +1
Query: 244 TLRNSVLLMGLSDSGKT---LLFVRLAYSQYRQT-----FTSMKENIEEYITSNKTLKIV 399
T+ ++L+G S GK+ L FV+ + YR++ F + I+E TS K L+I
Sbjct: 12 TINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDEN-TSVK-LEIW 69
Query: 400 DLPGQERLRN 429
D GQER ++
Sbjct: 70 DTAGQERYKS 79
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 6.4
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +1
Query: 247 LRNSVLLMGLSDSGK----TLLFVRLAYSQYRQTFTSMK-ENIEEYITSNKTLKIVDLPG 411
+R VLLMG S SGK +++F R+ ++ E+ N L + D G
Sbjct: 1 MRKKVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGG 60
Query: 412 QERLRNKFFEQHKSSAKGIVF 474
QE F E + S+ + +F
Sbjct: 61 QE----AFMENYLSAQRDHIF 77
>SPAC57A10.12c |ura3||dihydroorotate dehydrogenase
Ura3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 424 RNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTT 570
RNK H +V + +N ++E+ D+A+ L D +I GNTT
Sbjct: 293 RNKLNSPHPPV---LVKIAPDLN-EEELTDIADVLKKCKIDGVIVGNTT 337
>SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +1
Query: 193 IVLAVTLIFWWIF--SRRYTLRNSVLLMGL 276
+ +TL+F+W+F SRR + ++L+ G+
Sbjct: 48 VFFLLTLVFYWVFDLSRRRATQLTILVCGV 77
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 179 VMYRGSFRIGSV*IFSLTTSDSIVEFFRFTLTKSL 75
+ YRG RIG + T +D+ ++ +F +TK L
Sbjct: 893 IFYRGVKRIGYARLHRSTITDTELQTGKFLVTKDL 927
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,371,147
Number of Sequences: 5004
Number of extensions: 48336
Number of successful extensions: 175
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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