Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10l09
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 81 5e-16
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 62 4e-10
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 59 3e-09
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 56 2e-08
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 56 3e-08
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 55 4e-08
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 55 4e-08
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 55 5e-08
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 55 5e-08
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 51 8e-07
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 50 1e-06
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 49 3e-06
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 40 0.002
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 38 0.006
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 38 0.008
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 36 0.025
12_02_1105 + 26128108-26129032,26129535-26129663,26129924-26131104 29 3.7
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 29 3.7
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 29 3.7
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 29 3.7
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 28 5.0
04_03_0922 + 20834195-20836603 28 5.0
04_02_0006 + 8455219-8457469,8457560-8457924 28 5.0
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 26 5.3
06_01_0665 - 4855870-4855956,4856407-4856482,4856794-4856910,485... 27 8.7
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 81.4 bits (192), Expect = 5e-16
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Frame = +1
Query: 166 PRYITLLSLIVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAY-SQYRQTFT 342
P + + +V L+ + + + N+++L GLS SGKT+LF +L S ++ T T
Sbjct: 24 PEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGLSGSGKTILFYQLRDGSTHQGTVT 83
Query: 343 SMKENIEEYITSN--------KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQ 498
SM++N + ++ + K + +VD+PG RL+ K E +A GIV+V+D+ +
Sbjct: 84 SMEQNNDTFVLHSELERRGKVKPVHVVDVPGHARLKPKLDEVLPQAA-GIVYVVDAQDFL 142
Query: 499 KEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQ 603
+ AEYLY IL + P+LI CNK D+
Sbjct: 143 STMHAAAEYLYDILTKATVVKKRVPVLIFCNKTDK 177
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 61.7 bits (143), Expect = 4e-10
Identities = 33/114 (28%), Positives = 66/114 (57%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 438
V+++GL +GKT + RL + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYRLHMGEVLSTVPTVGFNVEKVQYKNVVFTVWDVGGQEKLR-PLW 78
Query: 439 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 600
+ + S++ +++V+DS++ ++ I D + TI+ DP++ + +L+ NKQD
Sbjct: 79 KMYLSNSDALIYVVDSLD-RERIIDARQEFQTIIKDPLMANSI--ILVFANKQD 129
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/125 (28%), Positives = 67/125 (53%)
Frame = +1
Query: 226 IFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDL 405
+F T VL++GL +GKT + RL + + ++ N+E+ N + D+
Sbjct: 8 LFDSFCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAFTVWDV 67
Query: 406 PGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLIL 585
GQ++LR + Q+ +A +++V+DS++ ++ I E I+ DP++ + +L+L
Sbjct: 68 GGQDKLR-PLWRQYFRNADALIYVVDSMD-RERIGVAKEEFQAIIRDPLMLNSV--ILLL 123
Query: 586 CNKQD 600
NKQD
Sbjct: 124 ANKQD 128
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/114 (27%), Positives = 65/114 (57%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 438
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLR-PLW 78
Query: 439 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 600
+ ++ G+++V+DS++ ++ + AE+ I+ DP++ + +L+ NKQD
Sbjct: 79 RHYFNNTDGLIYVVDSLDRERIGKAKAEF-QAIVNDPLMLNSV--ILVFANKQD 129
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 55.6 bits (128), Expect = 3e-08
Identities = 34/131 (25%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +1
Query: 211 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 387
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 388 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 567
+ D+ GQ+++R + + + +G++FV+DS N ++ + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRERVVEARDELHRMLNEDELR--D 118
Query: 568 TPLLILCNKQD 600
LL+ NKQD
Sbjct: 119 AVLLVFANKQD 129
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/114 (28%), Positives = 63/114 (55%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 438
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLR-PLW 78
Query: 439 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 600
+ ++ +++V+DS++ ++ R AE+ I+ DP + + LL+ NKQD
Sbjct: 79 RHYFNNTDALIYVVDSLDRERIGRARAEF-QAIINDPFMLNSV--LLVFANKQD 129
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/131 (25%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +1
Query: 211 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 387
L F +FSR ++ + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 388 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 567
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 118
Query: 568 TPLLILCNKQD 600
LL+ NKQD
Sbjct: 119 AVLLVFANKQD 129
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/131 (25%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Frame = +1
Query: 211 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 387
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 126 LAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 185
Query: 388 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 567
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 186 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 241
Query: 568 TPLLILCNKQD 600
LL+ NKQD
Sbjct: 242 AVLLVFANKQD 252
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/131 (25%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Frame = +1
Query: 211 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 387
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 388 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 567
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 118
Query: 568 TPLLILCNKQD 600
LL+ NKQD
Sbjct: 119 AVLLVFANKQD 129
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 50.8 bits (116), Expect = 8e-07
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Frame = +1
Query: 211 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 387
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 388 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCD----PII 555
+ D+ GQ+++R + + + +G++FV+DS N ++ + + + L+ +L +
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRERVVEARDELHRMLNELQNWKKD 120
Query: 556 QGNTTPLLILCNKQD 600
+ LL+ NKQD
Sbjct: 121 ELRDAVLLVFANKQD 135
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +1
Query: 382 KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQG 561
K + +VD+PG L+ K E +A GIVF +D+ + ++ VAEYLY IL +
Sbjct: 622 KPVHVVDVPGHAGLKPKLDEVLPQAA-GIVFAVDAQDFLSTMQVVAEYLYDILTKATVVK 680
Query: 562 NTTPLLILCNKQDQ 603
+LI CNK D+
Sbjct: 681 KRIHVLIFCNKTDK 694
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 62/114 (54%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 438
+L++GL +SGKT + +++ ++ NI+ +L I D+ GQ+ +R+ ++
Sbjct: 19 ILMVGLDNSGKTTIVLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIGGQKTIRS-YW 77
Query: 439 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 600
+ G+V+V+DS +I++ + D L+ +L + + G LL+ NKQD
Sbjct: 78 RNYFEQTDGLVWVVDSSDIRR-LDDCRAELHNLLKEERLAG--ASLLVFANKQD 128
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYR-------QTFTSMKENIEEYITSNKTLKIVDLPGQE 417
VL++G+ +GKT L ++ + + ++ NI +N L DL GQ
Sbjct: 20 VLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIEDANAKLVFWDLGGQV 79
Query: 418 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 597
LR +E++ A I++VID+ D L +L ++G PLLI NKQ
Sbjct: 80 GLRT-IWEKYYQEAHAIIYVIDAA-AASSFEDAKSALEKVLRHEDLKG--APLLIFANKQ 135
Query: 598 D 600
D
Sbjct: 136 D 136
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 37.9 bits (84), Expect = 0.006
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Frame = +1
Query: 211 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTS-------------- 345
++F +FS + R + +L++GL ++GKT + RL + T S
Sbjct: 3 IVFTRLFSSVFGNREARILVLGLDNAGKTTILYRLQMGEVVSTIPSGFPAPDSLIFFLPF 62
Query: 346 -MKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAE 522
+ N+E +N ++ DL GQ +R ++ + + + I++V+DS + + + E
Sbjct: 63 AIGFNVETVQYNNIKFQVWDLGGQTSIR-PYWRCYFPNTQAIIYVVDSSDTDRLVTAKEE 121
Query: 523 YLYTILCDPIIQGNTTPLLILCNKQD 600
+ + IL + ++G +L+ NKQD
Sbjct: 122 F-HAILEEDELKG--AVVLVYANKQD 144
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 37.5 bits (83), Expect = 0.008
Identities = 28/114 (24%), Positives = 53/114 (46%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 438
+L +GL ++GKT L L + Q + EE K DL G + + + +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQ-IARRVW 81
Query: 439 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 600
+ + + +V+++D+ + ++ + + L +L D + T P LIL NK D
Sbjct: 82 KDYYAKVDAVVYLVDAYD-KERFSESKKELDALLSDDSLA--TVPFLILGNKID 132
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 35.9 bits (79), Expect = 0.025
Identities = 27/114 (23%), Positives = 52/114 (45%)
Frame = +1
Query: 259 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 438
+L +GL ++GKT L L + Q + EE K DL G + + + +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQ-IARRVW 81
Query: 439 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 600
+ + + +V+++D+ + ++ + + L +L D + P LIL NK D
Sbjct: 82 KDYYAKVDAVVYLVDAYD-KERFAESKKELDALLSDDSLA--AVPFLILGNKID 132
>12_02_1105 + 26128108-26129032,26129535-26129663,26129924-26131104
Length = 744
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = -2
Query: 554 MIGSHKIVYRYSATSLISFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLE 375
+IG +K + T S+C I S ++ P A + CC + P T + + E
Sbjct: 149 LIGGYKGTVSHYVTGCYSYCESINSTSDGAPCAGMGCC------EAAIPTDLTAWGAMFE 202
Query: 374 VIYSSIFSF 348
+ S ++SF
Sbjct: 203 MNQSKVWSF 211
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 573 GSCVSLNDRITQDCV*VFCYISDFFLYIDRINHKHNSLSTTLVL 442
G+C+ + D + V VF +S L +D+ HK+ L T V+
Sbjct: 159 GTCMVIGDGVLTPAVSVFSAVSGLELSMDKDQHKYILLPITCVI 202
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 472 FVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLIL 585
F ++++ +E+ V YLY LCDP + P+L+L
Sbjct: 285 FFLEAVPPLEELNTVNLYLYIQLCDPRARLVVLPILVL 322
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 548 GSHKIVYRYSATSLISFCILIESITNTIPLALLLCCSKNLFLSLSCP 408
G+ ++VY ++A +F + SI + L CCS+ L + CP
Sbjct: 323 GARRVVYPWNAPVPQAFPLARCSICGAVALRYSFCCSRILCGTCGCP 369
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 190 LIVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMK--ENIE 363
L + + L++ +FS + R+ VLL G +GKTLL +A ++ F S+K E I
Sbjct: 670 LDTIQLPLLYKHLFSSKLGKRSGVLLYGPPGTGKTLLAKAVA-TECSLNFLSVKGPELIN 728
Query: 364 EYI 372
Y+
Sbjct: 729 MYV 731
>04_03_0922 + 20834195-20836603
Length = 802
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 175 ITLLSLIVLAVTLIFWWIFSRRY 243
++ +L +LA+ L+ WW S+RY
Sbjct: 456 LSFAALFMLAIALVIWWNKSKRY 478
>04_02_0006 + 8455219-8457469,8457560-8457924
Length = 871
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -1
Query: 492 IDRINHKHNSLSTTL-VLFKEFISQSLLSRQINYFQ 388
I RI+ N+LS+ + V F+ FIS + L+ NYF+
Sbjct: 393 IQRIDLSENNLSSEVPVFFENFISLAHLNLSYNYFE 428
>04_04_1122 + 31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 25.8 bits (54), Expect(2) = 5.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 426 SQSLLSRQINYFQCFIRSYILFNIFFHRSK 337
SQS+ ++NY +C+++ L + F R K
Sbjct: 1072 SQSIYQDELNYLECWVKDEKLDQLPFARQK 1101
Score = 20.6 bits (41), Expect(2) = 5.3
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 504 FFLYIDRINHKHN 466
F+ +DR++HK N
Sbjct: 1024 FYTTLDRLDHKRN 1036
>06_01_0665 -
4855870-4855956,4856407-4856482,4856794-4856910,
4857062-4857127,4858578-4858670,4858788-4858909,
4859810-4860365,4860485-4860628,4860698-4860831,
4861003-4861100,4861172-4861353,4861464-4861540,
4862083-4862305,4862580-4862745,4862836-4863040,
4864981-4865199
Length = 854
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 379 NKTLKIV--DLPGQERLRNKFFEQHKSSAKGIVF 474
+K +KI+ DLPG+ LR ++ HK+S + F
Sbjct: 406 DKAIKIINNDLPGENHLRFLHWDLHKNSQSKLYF 439
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,597,121
Number of Sequences: 37544
Number of extensions: 250667
Number of successful extensions: 732
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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