BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10l06 (599 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D83492-1|BAA21560.1| 1006|Homo sapiens Eph-family protein protein. 31 2.3 BC110607-1|AAI10608.2| 1006|Homo sapiens EPH receptor B6 protein. 31 2.3 BC110606-1|AAI10607.1| 729|Homo sapiens EPHB6 protein protein. 31 2.3 AY280502-1|AAP20939.1| 1006|Homo sapiens EPHB6 protein. 31 2.3 Y13619-1|CAA73941.1| 2070|Homo sapiens DFFRY protein. 31 4.1 Y13618-1|CAA73940.1| 2555|Homo sapiens DFFRY protein. 31 4.1 >D83492-1|BAA21560.1| 1006|Homo sapiens Eph-family protein protein. Length = 1006 Score = 31.5 bits (68), Expect = 2.3 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -1 Query: 587 LESFXLIHHPLVYPILLLPVHCFLQV*VVHHQPQLPSC-LQWA 462 L SF +H L +L+ H +V + H PQ PSC L+WA Sbjct: 771 LSSFAFVHRSLSAHSVLVNSHLVCKVARLGHSPQGPSCLLRWA 813 >BC110607-1|AAI10608.2| 1006|Homo sapiens EPH receptor B6 protein. Length = 1006 Score = 31.5 bits (68), Expect = 2.3 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -1 Query: 587 LESFXLIHHPLVYPILLLPVHCFLQV*VVHHQPQLPSC-LQWA 462 L SF +H L +L+ H +V + H PQ PSC L+WA Sbjct: 771 LSSFAFVHRSLSAHSVLVNSHLVCKVARLGHSPQGPSCLLRWA 813 >BC110606-1|AAI10607.1| 729|Homo sapiens EPHB6 protein protein. Length = 729 Score = 31.5 bits (68), Expect = 2.3 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -1 Query: 587 LESFXLIHHPLVYPILLLPVHCFLQV*VVHHQPQLPSC-LQWA 462 L SF +H L +L+ H +V + H PQ PSC L+WA Sbjct: 494 LSSFAFVHRSLSAHSVLVNSHLVCKVARLGHSPQGPSCLLRWA 536 >AY280502-1|AAP20939.1| 1006|Homo sapiens EPHB6 protein. Length = 1006 Score = 31.5 bits (68), Expect = 2.3 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -1 Query: 587 LESFXLIHHPLVYPILLLPVHCFLQV*VVHHQPQLPSC-LQWA 462 L SF +H L +L+ H +V + H PQ PSC L+WA Sbjct: 771 LSSFAFVHRSLSAHSVLVNSHLVCKVARLGHSPQGPSCLLRWA 813 >Y13619-1|CAA73941.1| 2070|Homo sapiens DFFRY protein. Length = 2070 Score = 30.7 bits (66), Expect = 4.1 Identities = 17/49 (34%), Positives = 30/49 (61%) Frame = +2 Query: 149 ENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSP 295 EN+ ++IG+ KD + +++K++ +N N +PS S S + ST SP Sbjct: 945 ENDRKLIGQLNLKDKSLITAKLTQINFN----MPS-SPDSSSDSSTASP 988 >Y13618-1|CAA73940.1| 2555|Homo sapiens DFFRY protein. Length = 2555 Score = 30.7 bits (66), Expect = 4.1 Identities = 17/49 (34%), Positives = 30/49 (61%) Frame = +2 Query: 149 ENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSP 295 EN+ ++IG+ KD + +++K++ +N N +PS S S + ST SP Sbjct: 945 ENDRKLIGQLNLKDKSLITAKLTQINFN----MPS-SPDSSSDSSTASP 988 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 71,231,051 Number of Sequences: 237096 Number of extensions: 1285494 Number of successful extensions: 4530 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3994 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4503 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6297951520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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