BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10l06
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83492-1|BAA21560.1| 1006|Homo sapiens Eph-family protein protein. 31 2.3
BC110607-1|AAI10608.2| 1006|Homo sapiens EPH receptor B6 protein. 31 2.3
BC110606-1|AAI10607.1| 729|Homo sapiens EPHB6 protein protein. 31 2.3
AY280502-1|AAP20939.1| 1006|Homo sapiens EPHB6 protein. 31 2.3
Y13619-1|CAA73941.1| 2070|Homo sapiens DFFRY protein. 31 4.1
Y13618-1|CAA73940.1| 2555|Homo sapiens DFFRY protein. 31 4.1
>D83492-1|BAA21560.1| 1006|Homo sapiens Eph-family protein protein.
Length = 1006
Score = 31.5 bits (68), Expect = 2.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 587 LESFXLIHHPLVYPILLLPVHCFLQV*VVHHQPQLPSC-LQWA 462
L SF +H L +L+ H +V + H PQ PSC L+WA
Sbjct: 771 LSSFAFVHRSLSAHSVLVNSHLVCKVARLGHSPQGPSCLLRWA 813
>BC110607-1|AAI10608.2| 1006|Homo sapiens EPH receptor B6 protein.
Length = 1006
Score = 31.5 bits (68), Expect = 2.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 587 LESFXLIHHPLVYPILLLPVHCFLQV*VVHHQPQLPSC-LQWA 462
L SF +H L +L+ H +V + H PQ PSC L+WA
Sbjct: 771 LSSFAFVHRSLSAHSVLVNSHLVCKVARLGHSPQGPSCLLRWA 813
>BC110606-1|AAI10607.1| 729|Homo sapiens EPHB6 protein protein.
Length = 729
Score = 31.5 bits (68), Expect = 2.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 587 LESFXLIHHPLVYPILLLPVHCFLQV*VVHHQPQLPSC-LQWA 462
L SF +H L +L+ H +V + H PQ PSC L+WA
Sbjct: 494 LSSFAFVHRSLSAHSVLVNSHLVCKVARLGHSPQGPSCLLRWA 536
>AY280502-1|AAP20939.1| 1006|Homo sapiens EPHB6 protein.
Length = 1006
Score = 31.5 bits (68), Expect = 2.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 587 LESFXLIHHPLVYPILLLPVHCFLQV*VVHHQPQLPSC-LQWA 462
L SF +H L +L+ H +V + H PQ PSC L+WA
Sbjct: 771 LSSFAFVHRSLSAHSVLVNSHLVCKVARLGHSPQGPSCLLRWA 813
>Y13619-1|CAA73941.1| 2070|Homo sapiens DFFRY protein.
Length = 2070
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 149 ENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSP 295
EN+ ++IG+ KD + +++K++ +N N +PS S S + ST SP
Sbjct: 945 ENDRKLIGQLNLKDKSLITAKLTQINFN----MPS-SPDSSSDSSTASP 988
>Y13618-1|CAA73940.1| 2555|Homo sapiens DFFRY protein.
Length = 2555
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 149 ENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSP 295
EN+ ++IG+ KD + +++K++ +N N +PS S S + ST SP
Sbjct: 945 ENDRKLIGQLNLKDKSLITAKLTQINFN----MPS-SPDSSSDSSTASP 988
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,231,051
Number of Sequences: 237096
Number of extensions: 1285494
Number of successful extensions: 4530
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4503
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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