Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l04
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089683-1|AAL90421.1|  340|Drosophila melanogaster RH59033p pro...    71   1e-12
AE013599-937|AAF58893.2|  340|Drosophila melanogaster CG1665-PA ...    69   4e-12
AY118319-1|AAM48348.1|  781|Drosophila melanogaster HL08052p pro...    33   0.43 
AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like ...    33   0.43 
AE014298-3026|AAF50901.1|  781|Drosophila melanogaster CG1692-PA...    33   0.43 
AE014296-2013|AAS65037.1|  518|Drosophila melanogaster CG7319-PC...    29   5.3  

>AY089683-1|AAL90421.1|  340|Drosophila melanogaster RH59033p
           protein.
          Length = 340

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
 Frame = +1

Query: 367 IPENWTKVGTLKAINAYPIKSCAPVMLEKA----ECSILGLKDGWLRDRVVMVIDEKNNF 534
           +P+ W +VGT++ I+ +P+KSCAP+ + K     +C +L +    +RDR +MV++EKN  
Sbjct: 43  VPQKWRRVGTVERIHFFPVKSCAPMDISKPGVEYDCDVLSMSFEGIRDRTLMVVNEKNEM 102

Query: 535 VTARAFPELLTVQPTIRSSILTVKHAQMEP 624
           +TARA+P +  ++    S    V  AQ  P
Sbjct: 103 ITARAYPLMTQIKSKKVSPSKLVFSAQDMP 132


>AE013599-937|AAF58893.2|  340|Drosophila melanogaster CG1665-PA
           protein.
          Length = 340

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = +1

Query: 367 IPENWTKVGTLKAINAYPIKSCAPVMLEKA----ECSILGLKDGWLRDRVVMVIDEKNNF 534
           +P+ W +VGT++ I+ +P+KSCAP+ + K     +C +L +    +RDR +MV++EKN  
Sbjct: 43  VPQKWRRVGTVERIHFFPVKSCAPMDISKPGVEYDCDVLSMSFEGIRDRTLMVVNEKNEM 102

Query: 535 VTARAFPELLTVQPTIRSSILTVKHAQMEP 624
           +TAR +P +  ++    S    V  AQ  P
Sbjct: 103 ITARVYPLMTQIKSKKVSPSKLVFSAQDMP 132


>AY118319-1|AAM48348.1|  781|Drosophila melanogaster HL08052p
           protein.
          Length = 781

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +1

Query: 415 YPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEKNNFVTARAFPELLTVQPTIRSSI 594
           YP+KSCA   +E      L    G   DR  M++D     +T +   EL  ++P I+   
Sbjct: 519 YPVKSCAAFKIELPGSWPL-TDQGLKYDREWMIVDMNGMALTQKRCTELCLIRPVIKVDQ 577

Query: 595 LTVKHAQMEPLHVNL 639
           L ++  +   + V L
Sbjct: 578 LELQFGENSTISVPL 592


>AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like
           protein protein.
          Length = 737

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +1

Query: 415 YPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEKNNFVTARAFPELLTVQPTIRSSI 594
           YP+KSCA   +E      L    G   DR  M++D     +T +   EL  ++P I+   
Sbjct: 519 YPVKSCAAFKIELPGSWPL-TDQGLKYDREWMIVDMNGMALTQKRCTELCLIRPVIKVDQ 577

Query: 595 LTVKHAQMEPLHVNL 639
           L ++  +   + V L
Sbjct: 578 LELQFGENSTISVPL 592


>AE014298-3026|AAF50901.1|  781|Drosophila melanogaster CG1692-PA
           protein.
          Length = 781

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +1

Query: 415 YPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEKNNFVTARAFPELLTVQPTIRSSI 594
           YP+KSCA   +E      L    G   DR  M++D     +T +   EL  ++P I+   
Sbjct: 519 YPVKSCAAFKIELPGSWPL-TDQGLKYDREWMIVDMNGMALTQKRCTELCLIRPVIKVDQ 577

Query: 595 LTVKHAQMEPLHVNL 639
           L ++  +   + V L
Sbjct: 578 LELQFGENSTISVPL 592


>AE014296-2013|AAS65037.1|  518|Drosophila melanogaster CG7319-PC,
           isoform C protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +3

Query: 285 CRRDGSWCAWRCLLRLSPVLSRKQEDKNTRKLD*SRNAQSYQRLSN*IMCASNVG 449
           CR+  + CAW+  LR       +  ++N   L  +R A+   RL+  IM AS  G
Sbjct: 57  CRQVVAHCAWKSALRCRTSRRTRATNENFIILKSARKARKKGRLAAFIMSASEQG 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,965,780
Number of Sequences: 53049
Number of extensions: 423319
Number of successful extensions: 737
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)