Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l04
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical pr...    59   3e-09
U88177-7|AAB42288.1|  339|Caenorhabditis elegans Hypothetical pr...    59   3e-09
AF038619-4|AAB92074.1|  340|Caenorhabditis elegans Hypothetical ...    56   2e-08
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81142-6|CAB03508.1|  344|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical
           protein F22B8.7 protein.
          Length = 339

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +1

Query: 370 PENWTKVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEK-NNFVTAR 546
           P  W  VG +K+++ +PIKSC  V +   +C+ LG   G L DR  M+++E    F+TAR
Sbjct: 36  PREWVPVGVVKSLHIFPIKSCKSVDVFAFKCTKLGPVMGDLEDRAFMLVEESTGKFITAR 95

Query: 547 AFPELLTVQPTIRSSILTVKHAQMEPLHVNL 639
             P+L+ V+  +   +L V       L V+L
Sbjct: 96  QKPKLVHVENYMTDGMLEVTVPGQPKLSVDL 126


>U88177-7|AAB42288.1|  339|Caenorhabditis elegans Hypothetical
           protein F53E10.1 protein.
          Length = 339

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +1

Query: 379 WTKVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEK-NNFVTARAFP 555
           W  +G +K ++ YPIKSC PV +   +C+ LG     L DRV ++++E    F+TAR  P
Sbjct: 39  WVPIGIVKGLHIYPIKSCKPVDVFAFKCTKLGPMMEELEDRVFVLVEESTGKFITARQKP 98

Query: 556 ELLTVQPTIRSSILTVKHAQMEPLHVNL 639
           +L+ V+  +   IL +       L V+L
Sbjct: 99  KLVNVESYMTDGILEISVPGHPKLSVDL 126


>AF038619-4|AAB92074.1|  340|Caenorhabditis elegans Hypothetical
           protein F56A11.5 protein.
          Length = 340

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
 Frame = +1

Query: 355 KKIKIPE-NWTKVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEKNN 531
           KK   P+  W  VG +K+++ YPIKSC    + +  C+  G + G   DR  +VI+    
Sbjct: 33  KKYSKPKAEWVPVGRIKSLHLYPIKSCKGKEVFQYRCTPFGPRLGEYLDRHFLVINSDGK 92

Query: 532 FVTARAFPELLTVQPTIRSSILTVKHAQME 621
           F TAR  P+++ ++  I+  I+ V +   E
Sbjct: 93  FYTARTKPQMVLIETLIKDGIVRVSYPGRE 122


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 11   INLLFDPHIIPDFTKQFN*TISLHYNCTLENI 106
            +NLL D   + +F ++ N  IS+HY  T +N+
Sbjct: 3392 VNLLSDSEWLREFHREVNKRISIHYRYTSDNL 3423


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 11   INLLFDPHIIPDFTKQFN*TISLHYNCTLENI 106
            +NLL D   + +F ++ N  IS+HY  T +N+
Sbjct: 3392 VNLLSDSEWLREFHREVNKRISIHYRYTSDNL 3423


>Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical
           protein F53F8.1 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -1

Query: 633 NMQRFHLRVFHSKNGA---PNCRLHSQ*LRKSPRCNEVVLFIYNHYDSV 496
           + Q +H +  H  NGA   P   +H+      P  N+V+   YNH++ V
Sbjct: 82  HQQHYHQQSHHHYNGAAAAPVINVHNYHFHTGPVNNQVIEQHYNHHNHV 130


>Z81142-6|CAB03508.1|  344|Caenorhabditis elegans Hypothetical
           protein ZK1037.9 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 306 CAWRCLLRLSPVLSRKQEDKNTRKLD*SRNAQSYQRLSN*IM 431
           C    +L L  V+  ++ DKN ++L    NAQ +QR++  ++
Sbjct: 223 CVLFPILSLLLVIEIRKADKNQKRLTAPTNAQDFQRITRLVL 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,807,721
Number of Sequences: 27780
Number of extensions: 238175
Number of successful extensions: 562
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)