BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10l03 (659 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY075249-1|AAL68116.1| 430|Drosophila melanogaster AT21437p pro... 290 1e-78 AF125157-1|AAF20167.1| 420|Drosophila melanogaster tryptophanyl... 290 1e-78 AF125156-1|AAF20166.1| 430|Drosophila melanogaster tryptophanyl... 290 1e-78 AE014297-898|AAF54352.1| 430|Drosophila melanogaster CG9735-PB,... 290 1e-78 AE014297-897|AAG22136.1| 430|Drosophila melanogaster CG9735-PA,... 290 1e-78 L01790-1|AAA28932.1| 384|Drosophila melanogaster TH1 protein. 29 4.2 AE014297-4816|AAF57203.2| 644|Drosophila melanogaster CG2112-PA... 29 5.6 BT025090-1|ABE73261.1| 508|Drosophila melanogaster IP13374p pro... 28 9.8 AY075384-1|AAL68222.1| 787|Drosophila melanogaster LD23641p pro... 28 9.8 AE014297-4205|AAF56765.1| 787|Drosophila melanogaster CG5520-PA... 28 9.8 >AY075249-1|AAL68116.1| 430|Drosophila melanogaster AT21437p protein. Length = 430 Score = 290 bits (711), Expect = 1e-78 Identities = 124/182 (68%), Positives = 151/182 (82%) Frame = +3 Query: 114 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 293 A A ED VDPW V +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+ Sbjct: 38 ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 97 Query: 294 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 473 FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT Sbjct: 98 FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 157 Query: 474 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIXK 653 DDEK LW+D+KVEDA K+ NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RI K Sbjct: 158 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 217 Query: 654 CV 659 CV Sbjct: 218 CV 219 >AF125157-1|AAF20167.1| 420|Drosophila melanogaster tryptophanyl-tRNA synthetase protein. Length = 420 Score = 290 bits (711), Expect = 1e-78 Identities = 124/182 (68%), Positives = 151/182 (82%) Frame = +3 Query: 114 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 293 A A ED VDPW V +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+ Sbjct: 28 ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 87 Query: 294 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 473 FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT Sbjct: 88 FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 147 Query: 474 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIXK 653 DDEK LW+D+KVEDA K+ NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RI K Sbjct: 148 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 207 Query: 654 CV 659 CV Sbjct: 208 CV 209 >AF125156-1|AAF20166.1| 430|Drosophila melanogaster tryptophanyl-tRNA synthetase protein. Length = 430 Score = 290 bits (711), Expect = 1e-78 Identities = 124/182 (68%), Positives = 151/182 (82%) Frame = +3 Query: 114 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 293 A A ED VDPW V +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+ Sbjct: 38 ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 97 Query: 294 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 473 FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT Sbjct: 98 FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 157 Query: 474 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIXK 653 DDEK LW+D+KVEDA K+ NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RI K Sbjct: 158 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 217 Query: 654 CV 659 CV Sbjct: 218 CV 219 >AE014297-898|AAF54352.1| 430|Drosophila melanogaster CG9735-PB, isoform B protein. Length = 430 Score = 290 bits (711), Expect = 1e-78 Identities = 124/182 (68%), Positives = 151/182 (82%) Frame = +3 Query: 114 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 293 A A ED VDPW V +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+ Sbjct: 38 ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 97 Query: 294 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 473 FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT Sbjct: 98 FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 157 Query: 474 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIXK 653 DDEK LW+D+KVEDA K+ NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RI K Sbjct: 158 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 217 Query: 654 CV 659 CV Sbjct: 218 CV 219 >AE014297-897|AAG22136.1| 430|Drosophila melanogaster CG9735-PA, isoform A protein. Length = 430 Score = 290 bits (711), Expect = 1e-78 Identities = 124/182 (68%), Positives = 151/182 (82%) Frame = +3 Query: 114 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 293 A A ED VDPW V +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+ Sbjct: 38 ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 97 Query: 294 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 473 FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT Sbjct: 98 FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 157 Query: 474 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIXK 653 DDEK LW+D+KVEDA K+ NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RI K Sbjct: 158 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 217 Query: 654 CV 659 CV Sbjct: 218 CV 219 >L01790-1|AAA28932.1| 384|Drosophila melanogaster TH1 protein. Length = 384 Score = 29.5 bits (63), Expect = 4.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 492 WRDIKVEDARKMAYNNAKDIIAIGFDP 572 WR +KV + + M N+ K++I FDP Sbjct: 11 WRAVKVTEVQAMVENHLKEMILKSFDP 37 >AE014297-4816|AAF57203.2| 644|Drosophila melanogaster CG2112-PA protein. Length = 644 Score = 29.1 bits (62), Expect = 5.6 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 6/46 (13%) Frame = +3 Query: 474 DDEKVL-W---RDI--KVEDARKMAYNNAKDIIAIGFDPSNTFIFN 593 DD++VL W R++ K+ R M +A +I +GFD N++IF+ Sbjct: 116 DDKRVLLWNIDRELVSKLGKPRSMNEKHASNIFCLGFDTQNSYIFS 161 >BT025090-1|ABE73261.1| 508|Drosophila melanogaster IP13374p protein. Length = 508 Score = 28.3 bits (60), Expect = 9.8 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 8/122 (6%) Frame = +3 Query: 153 VTGKSDTGIDYDKLIKRFGSQKIDD--ELIQRFEKVIGRKAHHLLRRGIFFSHRDL-NVI 323 ++ SD ID +L+ S++++ EL R + KA H++ GI +H+DL N + Sbjct: 104 ISNASDA-IDKIRLLALSNSKELETNPELHIRIKADKENKALHIMDSGIGMTHQDLINNL 162 Query: 324 LNLHEAGKKFYLYTGRGPS-SDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT----DDEKV 488 + ++G +L + PS S+ + + MI F F V + +T DD++ Sbjct: 163 GTIAKSGTADFLAKMQDPSKSEGLDMNDMIG-QFGVGFYSAFLVADRVVVTTKHNDDKQY 221 Query: 489 LW 494 +W Sbjct: 222 IW 223 >AY075384-1|AAL68222.1| 787|Drosophila melanogaster LD23641p protein. Length = 787 Score = 28.3 bits (60), Expect = 9.8 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 8/122 (6%) Frame = +3 Query: 153 VTGKSDTGIDYDKLIKRFGSQKIDD--ELIQRFEKVIGRKAHHLLRRGIFFSHRDL-NVI 323 ++ SD ID +L+ S++++ EL R + KA H++ GI +H+DL N + Sbjct: 104 ISNASDA-IDKIRLLALSNSKELETNPELHIRIKADKENKALHIMDSGIGMTHQDLINNL 162 Query: 324 LNLHEAGKKFYLYTGRGPS-SDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT----DDEKV 488 + ++G +L + PS S+ + + MI F F V + +T DD++ Sbjct: 163 GTIAKSGTADFLAKMQDPSKSEGLDMNDMIG-QFGVGFYSAFLVADRVVVTTKHNDDKQY 221 Query: 489 LW 494 +W Sbjct: 222 IW 223 >AE014297-4205|AAF56765.1| 787|Drosophila melanogaster CG5520-PA protein. Length = 787 Score = 28.3 bits (60), Expect = 9.8 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 8/122 (6%) Frame = +3 Query: 153 VTGKSDTGIDYDKLIKRFGSQKIDD--ELIQRFEKVIGRKAHHLLRRGIFFSHRDL-NVI 323 ++ SD ID +L+ S++++ EL R + KA H++ GI +H+DL N + Sbjct: 104 ISNASDA-IDKIRLLALSNSKELETNPELHIRIKADKENKALHIMDSGIGMTHQDLINNL 162 Query: 324 LNLHEAGKKFYLYTGRGPS-SDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT----DDEKV 488 + ++G +L + PS S+ + + MI F F V + +T DD++ Sbjct: 163 GTIAKSGTADFLAKMQDPSKSEGLDMNDMIG-QFGVGFYSAFLVADRVVVTTKHNDDKQY 221 Query: 489 LW 494 +W Sbjct: 222 IW 223 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,652,298 Number of Sequences: 53049 Number of extensions: 554103 Number of successful extensions: 1495 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1485 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1495 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2827453950 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -