Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10l01
         (398 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   0.64 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   0.84 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   0.84 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   1.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   2.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   2.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   2.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.9  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.9  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   7.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   7.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   7.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   7.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   7.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   7.8  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 0.64
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 277 PSNITYPTTGTFPQTPVLPP 218
           PS+ +  + G FP TPV+ P
Sbjct: 65  PSSTSSGSLGQFPATPVIDP 84


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 242 PADASVATHGQFTRHGH 192
           PA   V+  G F+RH H
Sbjct: 158 PAPGEVSNSGSFSRHAH 174


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 242 PADASVATHGQFTRHGH 192
           PA   V+  G F+RH H
Sbjct: 158 PAPGEVSNSGSFSRHAH 174


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 283 TVPSNITYPTTGTFPQTPVLPPTGNS 206
           +VP+  +Y +   FP     PPT NS
Sbjct: 107 SVPTTASYGSDLYFPGATSQPPTDNS 132


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 396 FFLLSIYFFNILFI 355
           FFLL IY+F   FI
Sbjct: 141 FFLLCIYYFYCAFI 154


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 286 GTVPSNITYPTTGTFPQTPVLPP 218
           GT PS+  Y  T   P    +PP
Sbjct: 15  GTYPSDNYYNYTSDIPNAQQMPP 37


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 286 GTVPSNITYPTTGTFPQTPVLPP 218
           GT PS+  Y  T   P    +PP
Sbjct: 15  GTYPSDNYYNYTSDIPNAQQMPP 37


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 286 GTVPSNITYPTTGTFPQTPVLPP 218
           GT PS+  Y  T   P    +PP
Sbjct: 15  GTYPSDNYYNYTSDIPNAQQMPP 37


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 310 ATLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGN 209
           A+  +P A   P ++  PT    P T   PPT N
Sbjct: 206 ASKASPAAA--PRSVATPTGIPTPSTSASPPTVN 237


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 287 RHCTLEHHIS 258
           R CTL HH+S
Sbjct: 577 RICTLHHHLS 586



 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 281 CTLEHHIS 258
           CTL HH+S
Sbjct: 855 CTLHHHLS 862


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 35  GSLVLYVFVGSFRSERSFPSTWKP 106
           G   LYV  G F+S      TW P
Sbjct: 113 GGSCLYVPPGIFKSTCKMDITWFP 136


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 35  GSLVLYVFVGSFRSERSFPSTWKP 106
           G   LYV  G F+S      TW P
Sbjct: 113 GGSCLYVPPGIFKSTCKMDITWFP 136


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 35  GSLVLYVFVGSFRSERSFPSTWKP 106
           G   LYV  G F+S      TW P
Sbjct: 113 GGSCLYVPPGIFKSTCKMDITWFP 136


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 161 GIAPHISSIWLTNVASATRVSKYLGK 84
           G+   +  IW +N++    + KYL K
Sbjct: 446 GVKIPLVIIWSSNLSKRPYIYKYLDK 471


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 137 IWLTNVASATRVSKYLGKS 81
           +W +++  A  + KYL K+
Sbjct: 436 LWTSHLTQADVIEKYLSKA 454


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -2

Query: 322 PQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPD 200
           PQ   T  + P        T  +T   PQT   P +GN  D
Sbjct: 401 PQPTQTTESEPT-QASEQPTESSTTQKPQTTKTPESGNESD 440


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 378 YFFNILFI*RKIN 340
           YFFNILF  + +N
Sbjct: 86  YFFNILFRKKLLN 98


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 378 YFFNILFI*RKIN 340
           YFFNILF  + +N
Sbjct: 82  YFFNILFRKKLLN 94


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 281 CTLEHHIS 258
           CTL HH+S
Sbjct: 223 CTLHHHLS 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,761
Number of Sequences: 336
Number of extensions: 2522
Number of successful extensions: 26
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)