Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10l01
(398 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 24 0.56
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 0.97
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 1.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 3.9
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 5.2
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 5.2
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 5.2
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 5.2
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 5.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 6.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 20 9.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 9.1
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 24.2 bits (50), Expect = 0.56
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 56 FVGSFRSERSFPSTWKPGLRLQR 124
F+ F SE ++P+T G RLQR
Sbjct: 466 FIAVFLSENNYPTTSIHGDRLQR 488
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.4 bits (48), Expect = 0.97
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 93 LGKERSERKDPTNT*STSDPSCGRKR 16
L + +E PT+T ++ PSC R+R
Sbjct: 80 LQADLAEASQPTSTTTSVTPSCRRQR 105
Score = 23.4 bits (48), Expect = 0.97
Identities = 15/54 (27%), Positives = 20/54 (37%)
Frame = -3
Query: 294 LQPALYPRTSHIPLQARSRRRQCCHPRAIHPTRPHRRSQLDHHTGHCTPHFQHM 133
L P+ +P H P Q R H + + T HH H T QH+
Sbjct: 312 LPPSYHPHQHH-PSQYHPHRGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHL 364
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 1.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 210 IHPTRPHRRSQLDHHTGHCTPHFQH 136
IH T PH HH+ TPH QH
Sbjct: 426 IHAT-PHH-----HHSHAATPHHQH 444
Score = 22.2 bits (45), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 314 VGHAHQSSSRHCTLEHHISH 255
+GH H S H T HH SH
Sbjct: 419 MGHGH--SHIHATPHHHHSH 436
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 3.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 340 YAGPLHPQLLATLTNPPAGTVPS 272
Y +H Q+ + L PAG+V S
Sbjct: 70 YRQEVHAQVYSCLARSPAGSVHS 92
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.0 bits (42), Expect = 5.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 37 VAGTLCVCWVFS 72
+ G CV W+FS
Sbjct: 72 LVGNCCVIWIFS 83
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.0 bits (42), Expect = 5.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 23 RPQDGSLVLYVF 58
RP+DG+L+L+ +
Sbjct: 125 RPEDGALILHYY 136
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 5.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 37 VAGTLCVCWVFS 72
+ G CV W+FS
Sbjct: 72 LVGNCCVIWIFS 83
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 260 ICDVRGYSAGWRIGERGQQL 319
+C YS GW G+R L
Sbjct: 20 MCQTFTYSHGWTNGKRSTSL 39
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.0 bits (42), Expect = 5.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 23 RPQDGSLVLYVF 58
RP+DG+L+L+ +
Sbjct: 125 RPEDGALILHYY 136
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 241 PQTPVLPPTGNSPDTA 194
P P PP+ + PD+A
Sbjct: 341 PAPPPPPPSSSGPDSA 356
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 159 HCTPHFQHMADERCKRNPGFQVL 91
HC AD+ +RNP VL
Sbjct: 309 HCNMENTEGADDASERNPRSAVL 331
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 9.1
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -2
Query: 298 NPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTAT 191
+PPA + T TT T T + TAT
Sbjct: 95 HPPASSTSLPATITTTTTTTTTTTATAAATATTTAT 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,685
Number of Sequences: 438
Number of extensions: 3380
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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