Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10l01
(398 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52490.1 68416.m05772 heat shock protein-related contains sim... 33 0.053
At2g43590.1 68415.m05417 chitinase, putative similar to basic en... 33 0.093
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 32 0.12
At3g12720.1 68416.m01589 myb family transcription factor contain... 31 0.28
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.37
At2g22660.1 68415.m02685 glycine-rich protein 31 0.37
At4g23350.1 68417.m03368 expressed protein predicted proteins, A... 30 0.65
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 29 1.1
At5g43940.1 68418.m05376 alcohol dehydrogenase class III / gluta... 29 1.1
At5g46270.1 68418.m05696 disease resistance protein (TIR-NBS-LRR... 28 2.0
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 28 2.0
At1g53620.1 68414.m06094 glycine-rich protein 28 2.0
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 28 2.6
At3g24540.1 68416.m03082 protein kinase family protein contains ... 28 2.6
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 28 2.6
At5g45380.1 68418.m05577 sodium:solute symporter family protein ... 27 3.5
At5g06839.1 68418.m00773 bZIP family transcription factor contai... 27 3.5
At2g33580.1 68415.m04115 protein kinase family protein / peptido... 27 3.5
At1g29380.1 68414.m03592 hypothetical protein 27 3.5
At1g14500.1 68414.m01719 ankyrin repeat family protein contains ... 27 3.5
At5g45800.1 68418.m05632 leucine-rich repeat transmembrane prote... 27 4.6
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 27 4.6
At2g17230.1 68415.m01990 phosphate-responsive 1 family protein s... 27 4.6
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 27 6.1
At4g14300.1 68417.m02203 heterogeneous nuclear ribonucleoprotein... 27 6.1
At2g29640.1 68415.m03601 josephin family protein contains Pfam d... 27 6.1
At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putat... 27 6.1
At1g04660.1 68414.m00463 glycine-rich protein 27 6.1
At4g32920.1 68417.m04685 glycine-rich protein 26 8.0
At4g31640.1 68417.m04494 transcriptional factor B3 family protei... 26 8.0
At3g09990.1 68416.m01199 equilibrative nucleoside transporter, p... 26 8.0
At2g47400.1 68415.m05916 CP12 domain-containing protein contains... 26 8.0
At2g26530.1 68415.m03183 expressed protein 26 8.0
At2g03505.1 68415.m00310 glycosyl hydrolase family protein 17 si... 26 8.0
At1g74230.1 68414.m08597 glycine-rich RNA-binding protein simila... 26 8.0
At1g65420.1 68414.m07422 expressed protein contains Pfam profile... 26 8.0
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 26 8.0
At1g60987.1 68414.m06866 expressed protein 26 8.0
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 26 8.0
>At3g52490.1 68416.m05772 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 815
Score = 33.5 bits (73), Expect = 0.053
Identities = 17/85 (20%), Positives = 34/85 (40%)
Frame = -1
Query: 302 HQSSSRHCTLEHHISHYRHVPADASVATHGQFTRHGHIAVASWTTTRGIAPHISSIWLTN 123
+ ++ +C +EH I + + HG+F G ++ + P + S+W
Sbjct: 302 YNNNDSYCVVEHMIMEIGKLACGLVMGDHGRFWLMGLATSQTYVRCKSGQPSLESLWCLT 361
Query: 122 VASATRVSKYLGKSVLSEKTQQTHK 48
+ S L S++SE + K
Sbjct: 362 TLTIPATSNSLRLSLVSESELEVKK 386
>At2g43590.1 68415.m05417 chitinase, putative similar to basic
endochitinase CHB4 precursor SP:Q06209 from [Brassica
napus]
Length = 264
Score = 32.7 bits (71), Expect = 0.093
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 51 MCLLGLFAQNALSQVLGNPGCACNVRQPYAGNVGC-NAPCGGPAGYGDVAVSGELPVGGN 227
+CLLG F++ SQ N GCA N+ G G +A CG G SG P GG+
Sbjct: 12 LCLLGFFSETVKSQ---NCGCAPNLCCSQFGYCGTDDAYCGVGCRSGPCRGSG-TPTGGS 67
Query: 228 TG 233
G
Sbjct: 68 VG 69
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/25 (60%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 301 TNPPAGTVPSNITYPTTGT-FPQTP 230
T PP GT P+N T P GT FP TP
Sbjct: 119 TTPPTGTTPTNGTTPFPGTPFPGTP 143
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -2
Query: 334 GPLHPQLLATLTNPPAGTVPSNITYPTTGT--FPQTP 230
G ++P ++ +PP+ T P+ T PT GT FP TP
Sbjct: 103 GCIYPSSPSSTRSPPSTTPPTGTT-PTNGTTPFPGTP 138
>At3g12720.1 68416.m01589 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 307
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2
Query: 307 TLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTAT 191
T NPP T P+ + P T P V+P N T T
Sbjct: 179 TNINPPTSTKPNKLKSPNQTTIPSQTVIPINDNMSSTQT 217
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 301 TNPPAGTVPSNITYPTT-GTFPQTPVLPPTGNSPDTA 194
T P G+ PS+ T PT G+ P +P P G SP ++
Sbjct: 474 TPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSS 510
Score = 30.3 bits (65), Expect = 0.49
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 301 TNPPAGTVPSNITYPTT-GTFPQTPVLPPTGNSP 203
T P G+ PS+ T PT G+ P +P P G SP
Sbjct: 487 TPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSP 520
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 301 TNPPAGTVPSNITYPTTGTFPQTPVLPPT 215
T P G+ PS+ T P+ G P +P + P+
Sbjct: 500 TPTPGGSPPSSPTTPSPGGSPPSPSISPS 528
>At2g22660.1 68415.m02685 glycine-rich protein
Length = 819
Score = 30.7 bits (66), Expect = 0.37
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 99 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNV 248
G G C + GC CGG G +V+ GG G CGN+
Sbjct: 766 GGYGARCKAAKASGCGGGCGGGCGGGCGDMVKSVNASGCGGGCNGECGNM 815
>At4g23350.1 68417.m03368 expressed protein predicted proteins,
Arabidopsis thaliana contains Pfam profile PF03080:
Arabidopsis proteins of unknown function
Length = 386
Score = 29.9 bits (64), Expect = 0.65
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 144 NVGCNAPCGGPAGYGDVAVS-GELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLV 302
++G A GGP ++S G + G +TG C + G+V T+P G ++
Sbjct: 189 SIGYMAVSGGPIEEDFASISVGWILHGSSTGGCYGMSCPGFVQVSKTIPVGAVL 242
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 322 PQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLP-PTGNSPDTATS 188
P T+T PP T P T P T P V P PT + P +A S
Sbjct: 26 PSPTTTVTPPPVATPPPAAT-PAPTTTPPPAVSPAPTSSPPSSAPS 70
>At5g43940.1 68418.m05376 alcohol dehydrogenase class III /
glutathione-dependent formaldehyde dehydrogenase /
GSH-FDH (ADHIII) identical to gi:1143388
Length = 379
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 153 CNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAG 293
C CG P G G V + ++ G N + G + VG + EG AG
Sbjct: 173 CLLGCGVPTGLGAVWNTAKVEPGSNVAIFG-LGTVGLAVAEGAKTAG 218
>At5g46270.1 68418.m05696 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1145
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -2
Query: 292 PAGTVPSNITYPTTGT---FPQTPVLPPTGNSP 203
P VPS TY TTGT P P+LP + P
Sbjct: 949 PGEQVPSYFTYRTTGTSTILPNIPLLPTQLSQP 981
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 322 PQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLPP 218
P L T+ P P+ PT T P PVLPP
Sbjct: 307 PPTLPTIPLLPTPPTPTLPPIPTIPTLPPLPVLPP 341
Score = 26.2 bits (55), Expect = 8.0
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -2
Query: 331 PLHPQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLP--PTGNSPDTAT 191
PL P + T T PP +PS + P P P LP P +P T T
Sbjct: 276 PLIPSI-PTPTLPPNPLIPSPPSLPPIPLIPTPPTLPTIPLLPTPPTPT 323
>At1g53620.1 68414.m06094 glycine-rich protein
Length = 143
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +3
Query: 141 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTV 284
G G C G AG GD GG G CG V G+V+F V
Sbjct: 73 GGGGDGGGCDGDAGGGD---------GGGCGGCGGCGVCGFVIFPSIV 111
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 27.9 bits (59), Expect = 2.6
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -1
Query: 338 RRTVASAVVGHAHQSSSRHCTLEHHISHYRHVPADASVATHGQFTRHGHIAVASWTTTRG 159
RR+ A GH H+S T HH R P A+ A H + R I V + T R
Sbjct: 23 RRSPPPATTGHHHRSPPPAITACHH----RRPPLPATTAGHHRQLRPPSIPVTTNTGHRH 78
Query: 158 IAP 150
P
Sbjct: 79 CRP 81
>At3g24540.1 68416.m03082 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 509
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2
Query: 307 TLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTAT 191
+L+ PP PS T P G P P+G P T T
Sbjct: 68 SLSPPPPPRSPSTSTPPRLGNRNPPPPASPSGQEPTTPT 106
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = -2
Query: 331 PLHPQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTAT 191
P +P T T PP P+N P T + PPT P T
Sbjct: 38 PTNPTTTPTATFPPVTITPTNPATTVPIVPPVTTIPPPTLTPPPVIT 84
Score = 26.2 bits (55), Expect = 8.0
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = -2
Query: 307 TLTNPPAGTVPSN-----ITYPTTGTFPQTPVLPPTGNSP 203
TLT PP T+P +T P T Q P P+G P
Sbjct: 76 TLTPPPVITIPPPTLTPPVTNPVTNPVTQYPPTQPSGTVP 115
>At5g45380.1 68418.m05577 sodium:solute symporter family protein
contains Pfam profile: PF00474 sodium:solute symporter
family
Length = 694
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 92 STWKPGLRLQRSSAICWKCGVQCPVWWSS 178
S W + +SS + W+ GV P W++S
Sbjct: 91 SQWTWAATILQSSNVAWQYGVSGPFWYAS 119
>At5g06839.1 68418.m00773 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 417
Score = 27.5 bits (58), Expect = 3.5
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 269 HHISHYRHVPADASVATHGQF 207
HH +H++H+ + ++ ++HG F
Sbjct: 4 HHQNHHQHLSSSSATSSHGNF 24
>At2g33580.1 68415.m04115 protein kinase family protein /
peptidoglycan-binding LysM domain-containing protein
protein kinase [Arabidopsis thaliana] GI:2852449;
contains Pfam profiles PF01476: LysM domain, PF00069:
Protein kinase domain
Length = 664
Score = 27.5 bits (58), Expect = 3.5
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -2
Query: 316 LLATLTNPPAGTV--PSNITYPTTGTFPQTPVLPPTGNS 206
+L LT P V PS P T PQTPV PP +S
Sbjct: 236 VLVPLTTEPTKIVISPSPPPPPVVATPPQTPVDPPGSSS 274
>At1g29380.1 68414.m03592 hypothetical protein
Length = 228
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 213 PVGGNTGVCGNVPVVGYVMFEGTVPAGG 296
P GG + G P GY GT P GG
Sbjct: 70 PTGGYPPLDGTTPTGGYPPLYGTTPPGG 97
>At1g14500.1 68414.m01719 ankyrin repeat family protein contains
Pfam domain, PF00023: Ankyrin repeat
Length = 436
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 49 LCVCWVFSLRTLFPKYLETRVALATFVSHM 138
L +C F+L LFP YL + +A +SH+
Sbjct: 387 LFLCAAFTLYLLFPMYLFMEIFIALRLSHL 416
>At5g45800.1 68418.m05632 leucine-rich repeat transmembrane protein
kinase, putative
Length = 666
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 218 HGQFTRHGHIAVASWTTTRGIAPHISSIWLTNVA 117
H T HGH+ + T + P IS + N+A
Sbjct: 530 HHVGTTHGHLVATNILLTETLEPRISDFGINNIA 563
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 331 PLHPQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTATS 188
P +PQ P+G P YP P P PP+ P +A S
Sbjct: 335 PQYPQQPPPQLQHPSGYNPEEPPYPQQSYPPNPPRQPPSHPPPGSAPS 382
>At2g17230.1 68415.m01990 phosphate-responsive 1 family protein
similar to phi-1 (phosphate-induced gene) [Nicotiana
tabacum] GI:3759184; contains Pfam profile PF04674:
Phosphate-induced protein 1 conserved region
Length = 363
Score = 27.1 bits (57), Expect = 4.6
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Frame = +3
Query: 132 PYA--GNVGCNAP--CGGP---AGYGDVAVSGEL-PVGGNTGVCGNVPVVGYVMFE 275
PYA G G P C P GY GEL P G TGV G V V+G+ + E
Sbjct: 227 PYAWVGQSGKQCPEVCAYPFALPGYMGHGGPGELRPPNGETGVDGMVSVIGHELAE 282
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 331 PLHPQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLPPT 215
P+ P PP T P P T P TPV PPT
Sbjct: 163 PVKPPTTTPPVKPPTTTPP---VQPPTYNPPTTPVKPPT 198
>At4g14300.1 68417.m02203 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 411
Score = 26.6 bits (56), Expect = 6.1
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = +3
Query: 99 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEG 278
GNPG G G P P+GY + G ++G GN G V G
Sbjct: 309 GNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGY-GNQAAYGVV---G 364
Query: 279 TVPAGGLVSVANNCGCNG 332
P+GG +NN G G
Sbjct: 365 GRPSGG---GSNNPGSGG 379
>At2g29640.1 68415.m03601 josephin family protein contains Pfam
domain PF02099: Josephin; similar to Josephin-like
protein (Swiss-Prot:O82391) [Arabidopsis thaliana]
Length = 360
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 105 PGCACNVRQPYAGNVGCNAPCG 170
PG +V+ PY N GC CG
Sbjct: 246 PGKQSSVKGPYYKNPGCTTSCG 267
>At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 313
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 147 VGCNAPCGGPAGYGDVAVSGELPVGGNT 230
V C APC G +S ++P+GGN+
Sbjct: 203 VNCIAPCAPGVGELSFELSYKMPMGGNS 230
>At1g04660.1 68414.m00463 glycine-rich protein
Length = 212
Score = 26.6 bits (56), Expect = 6.1
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +3
Query: 138 AGNVGCNAPCGGPAGYGDVA--VSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVA 311
A +G GG G G V V G VGG G G V +G G GG + A
Sbjct: 104 AAGIGGFHSIGGVGGLGGVGGGVGGLGGVGGGVGGLGGVGGLGGAGLGGVGGVGGGIGKA 163
Query: 312 NNCG 323
G
Sbjct: 164 GGIG 167
>At4g32920.1 68417.m04685 glycine-rich protein
Length = 1432
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 195 AVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANNCGCNG 332
+ S E+ GG G + ++GY+ G+V A G G +G
Sbjct: 216 STSNEVDYGGGGGGTVAIEILGYISLNGSVLADGASGGVKGGGGSG 261
>At4g31640.1 68417.m04494 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 [Brassica
oleracea var. botrytis] GI:3170424; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 352
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 234 RQCCHPRAIHPTRPHRRSQLDHHTG 160
R C P+A RPH+RS++ +G
Sbjct: 242 RLCSRPKAGAEARPHKRSRVQSSSG 266
>At3g09990.1 68416.m01199 equilibrative nucleoside transporter,
putative (ENT2) identical to putative equilibrative
nucleoside transporter ENT2 [Arabidopsis thaliana]
GI:16518991; contains similarity to SWISS-PROT:Q14542
equilibrative nucleoside transporter 2 (Equilibrative
nitrobenzylmercaptopurine riboside-insensitive
nucleoside transporter, Equilibrative NBMPR-insensitive
nucleoside transporter, Nucleoside transporter, ei-type,
36 kDa nucleolar protein HNP36, Hydrophobic nucleolar
protein, 36 kDa, Delayed-early response protein 12)
[Homo sapiens]; contains Pfam profile PF01733:
Nucleoside transporter
Length = 417
Score = 26.2 bits (55), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 131 AICWKCGVQCPVWWSSWL 184
A+CW GV C + W+S L
Sbjct: 20 AVCWLLGVGCLLAWNSML 37
>At2g47400.1 68415.m05916 CP12 domain-containing protein contains
Pfam profile: PF02672 CP12 domain
Length = 124
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 154 AMPRVVVQ-LATAMWPCRVNCPW 219
A PRVVV+ +A + P R+N PW
Sbjct: 12 ATPRVVVRPVARVLGPVRLNYPW 34
>At2g26530.1 68415.m03183 expressed protein
Length = 317
Score = 26.2 bits (55), Expect = 8.0
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = -3
Query: 210 IHPTRPHRRSQLDHHTGHCTPHFQHMADERCKRNP---GFQVLGKERSERKDPTN 55
I P +P QLDHH H + R R+P G ++ K S RK P N
Sbjct: 98 IKPLKPPPYLQLDHH------HQPQILSPRSPRSPIAHGKNIIRKAFSPRKKPDN 146
>At2g03505.1 68415.m00310 glycosyl hydrolase family protein 17
similar to Glucan endo-1,3-beta-glucosidase precursor
(EC 3.2.1.39) ((1-3)-beta- glucan endohydrolase)
((1-3)-beta-glucanase) (Beta-1,3- endoglucanase)
(Swiss-Prot:P52409) [Triticum aestivum]; similar to beta
1,3-glucanase (GI:924953) [Triticum aestivum]
Length = 168
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 289 AGTVPSNITYPTTGTFPQTPVLPPTGN 209
AGT P+ T T TFP P P G+
Sbjct: 113 AGTTPTTGTPSGTQTFPGPPAFGPAGD 139
>At1g74230.1 68414.m08597 glycine-rich RNA-binding protein similar
to RNA-binding protein GB:S46286 from [Nicotiana
sylvestris]
Length = 289
Score = 26.2 bits (55), Expect = 8.0
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 135 YAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVP 251
Y GN + GG GYG G GGN G G P
Sbjct: 149 YGGNSSYSGNAGGGGGYG-----GNSSYGGNAGGYGGNP 182
>At1g65420.1 68414.m07422 expressed protein contains Pfam profile
PF04483: Protein of unknown function (DUF565)
Length = 197
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 48 FMCLLGLFAQNALSQVLGNPG 110
F+ LLG + NAL+ +LG G
Sbjct: 116 FLLLLGFYTANALATILGQTG 136
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 26.2 bits (55), Expect = 8.0
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = -2
Query: 304 LTNPPAGTV-PSNITYPTTGTFPQTPVLPPTGNSPDTATSXXXXXXXXXXXXPTFPAY-G 131
+ PP TV P N P +P++P LP SPD + + P FP G
Sbjct: 150 IPGPPDFTVTPRNPDSPYFPGYPESPDLPGNPGSPDFSGNPGPPSFPRNPGSPEFPGNPG 209
Query: 130 *RTLQAQPGFP 98
+ PG P
Sbjct: 210 APIIPRNPGSP 220
>At1g60987.1 68414.m06866 expressed protein
Length = 97
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 92 STWKPGLRLQRSSAIC 139
STW P +RL R S IC
Sbjct: 64 STWDPSVRLTRVSCIC 79
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 26.2 bits (55), Expect = 8.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 331 PLHPQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLPP 218
PL P T PPA P+N T P P PP
Sbjct: 360 PLTPGQFTTANAPPAPPGPANQTSPPPPPPPSAAAPPP 397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,871,480
Number of Sequences: 28952
Number of extensions: 233194
Number of successful extensions: 966
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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