Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k21
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.1  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   6.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.7  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 175 FNTDISTKLENSRNTLRKIARNDGAEFSKQSILNDMEK 288
           FN  +   L  S+  + K   N G E SKQ I N   K
Sbjct: 73  FNVSLRIILVFSKGKVIKSFFNQGYELSKQEIFNCCSK 110


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 236 VMMVLNFQNRAS*MTWRNLSKWL 304
           +   LNF    +  TWR L +W+
Sbjct: 146 ISFFLNFMLHCNNTTWRCLYRWI 168


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +1

Query: 238 NDGAEFSKQSILNDMEKFVKMVNTMDETVLVPSRLMNLPQ 357
           NDG       ++N   +F   V   + TV VP+    + Q
Sbjct: 237 NDGDNKPDTILVNGFGRFKHFVGADNSTVFVPTARFTVEQ 276


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 223 RKIARNDGAEFSKQSILNDMEK 288
           +++A  + AE  K+  LND+EK
Sbjct: 59  KELAEKEEAETLKRYKLNDLEK 80


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 223 RKIARNDGAEFSKQSILNDMEK 288
           +++A  + AE  K+  LND+EK
Sbjct: 219 KELAEKEEAETLKRYKLNDLEK 240


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 223 RKIARNDGAEFSKQSILNDMEK 288
           +++A  + AE  K+  LND+EK
Sbjct: 219 KELAEKEEAETLKRYKLNDLEK 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,914
Number of Sequences: 336
Number of extensions: 3105
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)