Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k19
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC24B10.13 |skb5||Shk1 kinase binding protein 5|Schizosaccharo... 33 0.026
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 33 0.026
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.081
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.25
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 29 0.43
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.75
SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1 |Schizosaccharom... 28 1.00
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 28 1.00
SPBP35G2.07 |ilv1||acetolactate synthase catalytic subunit|Schiz... 28 1.00
SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 27 2.3
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 27 3.0
SPAC8E11.03c |dmc1|dmp1|RecA family ATPase Dmc1|Schizosaccharomy... 26 5.3
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 7.0
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo... 25 7.0
SPCC61.05 |||S. pombe specific multicopy membrane protein family... 25 7.0
SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9 |Schiz... 25 7.0
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 25 7.0
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 9.3
>SPCC24B10.13 |skb5||Shk1 kinase binding protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 140
Score = 33.5 bits (73), Expect = 0.026
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 330 VVLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIPHSY 476
V L+DF P D+EL GQ + +L +D W+ S R G +P ++
Sbjct: 86 VALYDFEPLHDNELGFTTGQRLCILSESSDGWLIAYDDASGRSGLVPETF 135
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 33.5 bits (73), Expect = 0.026
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +3
Query: 309 LSPDSKMV-VLHDFTPCVDDELEVKRGQIVNVLYREND--WVYVIVAESRREGFIPHSYC 479
+ P K++ L+D+T E+ +G +V+ REND W V + GF+P S+
Sbjct: 22 IEPPRKVIRALYDYTARKATEVSFAKGDFFHVIGRENDKAWYEVCNPAAGTRGFVPVSH- 80
Query: 480 APCEHHDLKKKLPRSRSPADLAHRDVSQLSVSDGVTNDGHSELGS 614
++ K + R + L+ + T SEL S
Sbjct: 81 ----FEEIGKTVKSERDSDGSGQISFTDLTTNSSTTRSSISELHS 121
Score = 30.7 bits (66), Expect = 0.19
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +3
Query: 231 SPGMGRI--TGSASIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVL 404
S G G+I T + + R I + H S +V DF DELE K G+ + ++
Sbjct: 94 SDGSGQISFTDLTTNSSTTRSSISELHSGSQPLFGIVQFDFAAERPDELEAKAGEAIIII 153
Query: 405 YREN-DW-VYVIVAESRREGFIPHSY 476
R N +W V + G IP S+
Sbjct: 154 ARSNHEWLVAKPIGRLGGPGLIPLSF 179
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.081
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 321 SKMVVLHDFTPCVDDELEVKRGQIVNVLYR-ENDW---VYVIVAESRREGFIPHSYCAPC 488
+++V L+ + D+LE GQ+++V+ + DW YV +R+ G P + P
Sbjct: 6 TRVVALYPYRSSFSDDLEFDPGQVIDVVSNLDGDWYTGTYVDSDGNRKIGSFPKDFTEPA 65
Query: 489 E 491
E
Sbjct: 66 E 66
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.25
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 315 PDSKMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSY 476
P +KM L+D+T DE+ + Q ++ Y + D +++V + G P +Y
Sbjct: 81 PSTKMKALYDYTQQSVDEISFQADQTLD-CYGDTDSDWILVGFNNNFGLAPRNY 133
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 29.5 bits (63), Expect = 0.43
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Frame = +3
Query: 339 HDFTPCVDDELEVKRGQIVNVLYR--ENDWVYVIVAE----SRREGFIPHSYCAPCEHHD 500
+ F P ++EL++K+G ++ VL E WV + E + G P +YC P D
Sbjct: 430 YSFEPETENELKLKKGDLLLVLKEIDEGWWVGEKLGEDGVFTGNTGMFPSNYCVPAHPWD 489
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.7 bits (61), Expect = 0.75
Identities = 12/59 (20%), Positives = 31/59 (52%)
Frame = +3
Query: 300 EHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSY 476
EH + +V++D++P ++E+E+ + + +L +D ++ ++G P +Y
Sbjct: 721 EHTQPTKTPAIVIYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSNY 779
>SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 28.3 bits (60), Expect = 1.00
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 598 CPSFVTPSDTDNCETSRWAKSAGDLLLGSFFFKS 497
CP F+T S +CE + +A+ G + + SFF S
Sbjct: 216 CPQFITAS---SCEVAEFAEQWGFMKVSSFFMDS 246
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 1.00
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 273 TLVRVGIEKEHGLSPDSKM--VVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAES 446
+L V E+ P SK+ VVL+DFT + + GQ +L ++ +V V
Sbjct: 500 SLSNVKTEETTPAEPASKVDGVVLYDFTGEHEGVITASEGQEFTLLEPDDGSGWVRVKID 559
Query: 447 RREGFIPHSY 476
+G IP SY
Sbjct: 560 GTDGLIPASY 569
>SPBP35G2.07 |ilv1||acetolactate synthase catalytic
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 669
Score = 28.3 bits (60), Expect = 1.00
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 118 RHCKTWHFYVQSGSEGERRRNQVLETLTKTSPGPV 222
R C W+ V+ ++ RR ++ E T PGPV
Sbjct: 206 RSCTKWNVMVKDVADLPRRIDEAFEIATSGRPGPV 240
>SPAC26H5.06 |pot1||telomere end-binding protein Pot1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 555
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 379 FTSNSSSTHGVKSWSTTIF 323
FT + S HG K W TT++
Sbjct: 52 FTPSRQSLHGTKDWVTTVY 70
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 513 LPRSRSPADLAHRDVSQLSVSDGVTNDGHSEL 608
LP + P D + S V+ G+ DGH+ L
Sbjct: 210 LPNTTQPPDFVYDRPSDWDVNAGIDEDGHTAL 241
>SPAC8E11.03c |dmc1|dmp1|RecA family ATPase Dmc1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 332
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 91 KRFLLKIPPFSNLHFQKLRPFTSK 20
KRFLLKI FS KL+ SK
Sbjct: 50 KRFLLKIKGFSEAKVDKLKEAASK 73
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.4 bits (53), Expect = 7.0
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 132 CFTMSKSIHNCNTSNGFC*KYLHLAIYIFKNLDHSRQKVSN 10
CF K IHN +N K L + F +HS + N
Sbjct: 736 CFIQKKGIHNVTPNNLVIFKNLFPEVLSFVKSNHSYDPIIN 776
>SPBC8D2.05c |sfi1||spindle pole body protein
Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 840
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = +2
Query: 143 MSSQDQKGKEEEIK----FWRL*QRPLQAQFRTESWDGPHHRISKHRNISESWH 292
MS DQ E ++ FWR R ++ F W RN ++WH
Sbjct: 678 MSQADQFYNERLMRSAMVFWRYQLRAIKFYFNISDWKRREFNRQTLRNAFDAWH 731
>SPCC61.05 |||S. pombe specific multicopy membrane protein family
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 7.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 313 LRPCSFSMPTLTNVSMLADPVMRPIPGLSPELGLERSLSESPELDFFFFPLL 158
LR C ++ +T + L V+RP+ G LG + S +DF F L
Sbjct: 381 LRTCYIALAAVTVSNCLFLGVVRPLLGSQLSLGFQLITSCITFVDFLVFAFL 432
>SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 702
Score = 25.4 bits (53), Expect = 7.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 489 EHHDLKKKLPRSRSPADLAH 548
EH D K +PR +P DL +
Sbjct: 58 EHDDFVKSVPRKNNPTDLLY 77
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 365 VIHTWCEIMEHHHLRIRTEAMFLLN 291
+I + E+ H + +IRT+A+F LN
Sbjct: 179 MIPRFIELARHENPKIRTDALFCLN 203
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.0 bits (52), Expect = 9.3
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = -1
Query: 316 GLRPCSFSMPTLTNVSMLADPVMRPIPGLSPELGLERSLSESPELDFFFFPLLILTGHRN 137
GL+ + + N + + V R I + L + EL P L LTGH+
Sbjct: 1147 GLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDLLWRAAGKFELLDRILPKLFLTGHKT 1206
Query: 136 AMFYNV 119
MF+ +
Sbjct: 1207 LMFFQM 1212
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,648,111
Number of Sequences: 5004
Number of extensions: 54111
Number of successful extensions: 137
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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