Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k19
(643 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g07360.1 68415.m00843 SH3 domain-containing protein contains ... 30 1.5
At2g31865.2 68415.m03893 poly (ADP-ribose) glycohydrolase (PARG)... 29 2.0
At2g31865.1 68415.m03892 poly (ADP-ribose) glycohydrolase (PARG)... 29 2.0
At5g02310.1 68418.m00154 eceriferum3 protein, putative similar t... 29 3.5
At5g33406.1 68418.m03990 hAT dimerisation domain-containing prot... 28 6.1
At1g11410.1 68414.m01311 S-locus protein kinase, putative simila... 28 6.1
At5g20170.1 68418.m02402 expressed protein 27 8.0
At5g07260.1 68418.m00828 homeobox protein-related contains weak ... 27 8.0
At2g19230.1 68415.m02245 leucine-rich repeat protein kinase, put... 27 8.0
>At2g07360.1 68415.m00843 SH3 domain-containing protein contains Pfam
profile PF00018: SH3 domain
Length = 1196
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 336 LHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREG 458
L+DFT DDEL + + + + Y + W YV R+G
Sbjct: 1142 LYDFTAGGDDELNLTAEEELEIEYEVDGWFYVKKKRPGRDG 1182
>At2g31865.2 68415.m03893 poly (ADP-ribose) glycohydrolase (PARG)
family protein contains Pfam profile: PF05028 poly
(ADP-ribose) glycohydrolase (PARG)
Length = 532
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -2
Query: 540 NRQGIYFSGVFSLNHDVHMVHNMNAV*SXXXXXXXX*H-KPNHFLYIEH*QFVHVLPLTR 364
N QGI FSG+FS + H N + P F+ E +LPL
Sbjct: 169 NLQGINFSGLFSFPYMRHCTKQENKIKCLIHYFGRICRWMPTGFVSFER----KILPLEY 224
Query: 363 HPHMV 349
HPH V
Sbjct: 225 HPHFV 229
>At2g31865.1 68415.m03892 poly (ADP-ribose) glycohydrolase (PARG)
family protein contains Pfam profile: PF05028 poly
(ADP-ribose) glycohydrolase (PARG)
Length = 522
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -2
Query: 540 NRQGIYFSGVFSLNHDVHMVHNMNAV*SXXXXXXXX*H-KPNHFLYIEH*QFVHVLPLTR 364
N QGI FSG+FS + H N + P F+ E +LPL
Sbjct: 169 NLQGINFSGLFSFPYMRHCTKQENKIKCLIHYFGRICRWMPTGFVSFER----KILPLEY 224
Query: 363 HPHMV 349
HPH V
Sbjct: 225 HPHFV 229
>At5g02310.1 68418.m00154 eceriferum3 protein, putative similar to
eceriferum3 GI:1669655 from [Arabidopsis thaliana]
Length = 2006
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/99 (26%), Positives = 43/99 (43%)
Frame = +3
Query: 276 LVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRRE 455
L R G+ L+PD + +++ P + E+ G ++ +L +E + + AES R
Sbjct: 820 LSRFGLSSYLSLNPD----ITNEYEPVLVQEM---LGLLIQIL-QERRFCGLSTAESLRR 871
Query: 456 GFIPHSYCAPCEHHDLKKKLPRSRSPADLAHRDVSQLSV 572
I H L K LPR S +D + +SV
Sbjct: 872 EIIFKLATGDFTHSQLVKSLPRDLSKSDELQEVLDDVSV 910
>At5g33406.1 68418.m03990 hAT dimerisation domain-containing protein
low similarity to transposase [Fusarium oxysporum f. sp.
lycopersici] GI:3126916; contains Pfam profile PF05699:
hAT family dimerisation domain
Length = 485
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 571 TDNCETSRWAKSAGDLLLGSFFFK 500
+D S+W K AG + + SFFF+
Sbjct: 42 SDEWNASKWTKEAGGMKIKSFFFQ 65
>At1g11410.1 68414.m01311 S-locus protein kinase, putative similar
to receptor-like protein kinase [Arabidopsis thaliana]
gi|4008008|gb|AAC95352; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 840
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 232 LSPELGLERSLS-ESPELDFFFFPLLILTGHRNAMFYNVEIN 110
+SPE ++ S +S F L I+TG RN+ FY +N
Sbjct: 687 MSPEYAMDGQFSIKSDVYSFGVLILEIITGKRNSAFYEESLN 728
>At5g20170.1 68418.m02402 expressed protein
Length = 654
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 240 SQDSVLNWAWRGLCQSLQ 187
S+DSV W W+G+ ++LQ
Sbjct: 66 SKDSVEQWKWKGMVENLQ 83
>At5g07260.1 68418.m00828 homeobox protein-related contains weak
similarity to Homeobox protein FWA (Swiss-Prot:Q9FVI6)
[Arabidopsis thaliana]
Length = 541
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -1
Query: 376 TSNSSSTHGVKSWSTTIFESGLRPCSFSMPTLTNVSMLADPVMR 245
T NS+S G + W T + + C S+P++ + + D + R
Sbjct: 277 TFNSNSEFGAQRWLTALQKHYYNTCPVSIPSIGHNIQIFDQICR 320
>At2g19230.1 68415.m02245 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 877
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 301 SFSMPTLTNVSMLADPVMRPIP 236
SFS PT NVSM DP + P P
Sbjct: 855 SFSEPTEMNVSMTVDPGVLPQP 876
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,871,649
Number of Sequences: 28952
Number of extensions: 288925
Number of successful extensions: 820
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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