Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k18
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 307 LLLWCLNSLTLHSLVC*CIF 248
           L L CL+  TLH L   CI+
Sbjct: 194 LFLLCLDYFTLHLLFLPCIY 213


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -3

Query: 214 LSNFGFLIPSLLNIPTPWHEDLRSTRSSPKLLFKLSPFYEEE 89
           LS F + + S++ I         ++R + ++ +KL  FY EE
Sbjct: 215 LSVFVYTLVSVILIIMGCDVVASNSRKTAEMCYKLQGFYPEE 256


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory
          receptor candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 2  KMYLSMFFLFLSIGYLI 52
          K Y   FFL LSIG ++
Sbjct: 33 KFYAVAFFLALSIGVVV 49


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -3

Query: 547 SLEKLVPACGIRTPVQRYIRMHRTSY 470
           S+ +L+P    +  ++ Y  MH+  Y
Sbjct: 371 SINRLLPTAESKADIKMYADMHQYGY 396


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 162 GMKIFALRVHLPNYFLNYRHF 100
           G  IF  R   P Y+L + HF
Sbjct: 653 GYVIFRFRADNPGYWLFHCHF 673


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,864
Number of Sequences: 336
Number of extensions: 3072
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)