Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k15
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    26   0.22 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.2  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +2

Query: 203 VTMLDVLQEQQDFEDDANAVLGASDEKNCTYSTGYIKRQAIYACITCCPEAKDDQNQRA 379
           V + ++LQ  +  E+  N +L   ++K CT     +KR    A  T C +  D Q Q A
Sbjct: 30  VNLKEILQSDRLTENYVNCLL---EKKPCTPDGEELKRVLPDALKTSCAKCTDKQKQGA 85


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 539 YNQNFSGLYCICHRPYPDPDATF 607
           Y+Q  + + C+   P P+P  TF
Sbjct: 164 YHQFLAIIACMGPPPQPEPPVTF 186


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 248 DANAVLGASDEKNCTYSTGYIKRQAIY 328
           DA      +++ +C Y+  +IK ++IY
Sbjct: 179 DAVIKWSPNEDYSCEYNLVWIKEESIY 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,094
Number of Sequences: 336
Number of extensions: 3610
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)