Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k15
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75550-12|CAA99920.2| 356|Caenorhabditis elegans Hypothetical p... 128 2e-30
AF003140-6|AAD47122.2| 1145|Caenorhabditis elegans Hypothetical ... 48 7e-06
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 37 0.013
U23454-3|AAC46518.1| 192|Caenorhabditis elegans Hypothetical pr... 34 0.070
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 33 0.12
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 33 0.12
AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical ... 33 0.21
AL132862-7|CAB70228.1| 129|Caenorhabditis elegans Hypothetical ... 29 2.6
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 3.5
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 3.5
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 3.5
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 8.0
U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p... 27 8.0
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p... 27 8.0
U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical p... 27 8.0
>Z75550-12|CAA99920.2| 356|Caenorhabditis elegans Hypothetical
protein T22C1.1 protein.
Length = 356
Score = 128 bits (310), Expect = 2e-30
Identities = 55/135 (40%), Positives = 79/135 (58%)
Frame = +2
Query: 194 EKVVTMLDVLQEQQDFEDDANAVLGASDEKNCTYSTGYIKRQAIYACITCCPEAKDDQNQ 373
E+ VT+ ++++ ED A+ + + CTY+ GY RQ ++ C+TC P +
Sbjct: 20 EEAVTLGEIVETIDYLEDKADVLFATQNPNVCTYAEGYKPRQTLFTCLTCTPAP-----E 74
Query: 374 RAGVCLACSIACHENHDLVELYTKRNFRCDCGNPKFKSHPCQFTPNKTDFNEDNIYNQNF 553
AGVC C++ CH+ H +VELYTKR F+CDCGN KF C +K NE N+YN N+
Sbjct: 75 MAGVCYGCALNCHDGHIIVELYTKRKFKCDCGNSKFGEKKCALYEDKDAKNEYNMYNHNY 134
Query: 554 SGLYCICHRPYPDPD 598
+G +C C YPD D
Sbjct: 135 NGKFCTCDVFYPDED 149
>AF003140-6|AAD47122.2| 1145|Caenorhabditis elegans Hypothetical
protein C44E4.7 protein.
Length = 1145
Score = 47.6 bits (108), Expect = 7e-06
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 287 CTY-STG--YIKRQAIYACITCCPEAKDDQNQRAGVCLACSIACHENHDLVELYTKR-NF 454
CTY STG Y+ Q Y C TC + + GVC C+I CH HDL Y+K+ +F
Sbjct: 794 CTYKSTGRAYVT-QHWYNCYTC------NMMESEGVCSVCAINCHRGHDLA--YSKKGSF 844
Query: 455 RCDCGNPK 478
CDCG K
Sbjct: 845 FCDCGEKK 852
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +2
Query: 326 YACITCCPEAKDDQNQRAGVCLACSIACHENHDLVELYTKRNFRCDCGNPKFKSH 490
Y C TC + +R +C C CH H VEL F CDCG + H
Sbjct: 861 YRCTTC------NTTERNAICTNCIRTCHRGHS-VELVRFDRFFCDCGAGTLERH 908
>U23454-3|AAC46518.1| 192|Caenorhabditis elegans Hypothetical
protein C10A4.4 protein.
Length = 192
Score = 34.3 bits (75), Expect = 0.070
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 7 FFISLQIFKKYDWRVINRLF 66
FFIS Q+F+ YDWR I LF
Sbjct: 114 FFISEQVFESYDWRTIKELF 133
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = +2
Query: 221 LQEQQDFEDDANAVLGASDEKNCTYSTGYIKRQAIYACITCCPEAKDDQNQRAGVCLACS 400
+ E + +D +L +D + T++ Q IY C TC C C+
Sbjct: 1184 VDESHNADDSPLFILCYNDVCSFTWTGEDHINQDIYECKTC------GLTGSLCCCSECA 1237
Query: 401 IACHENHDLVELYTKRNFRCDC 466
+ CH NHD T CDC
Sbjct: 1238 LTCHRNHDCRLKRTSPTAYCDC 1259
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = +2
Query: 221 LQEQQDFEDDANAVLGASDEKNCTYSTGYIKRQAIYACITCCPEAKDDQNQRAGVCLACS 400
+ E + +D +L +D + T++ Q IY C TC C C+
Sbjct: 1184 VDESHNADDSPLFILCYNDVCSFTWTGEDHINQDIYECKTC------GLTGSLCCCSECA 1237
Query: 401 IACHENHDLVELYTKRNFRCDC 466
+ CH NHD T CDC
Sbjct: 1238 LTCHRNHDCRLKRTSPTAYCDC 1259
>AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical
protein BE0003N10.3 protein.
Length = 1145
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 224 QEQQDFEDDANAVLGASDEKNCTYSTG---YIKRQAIYACITCCPEAKDDQNQRAGVCLA 394
++Q D+ + V A + C +S + Y CITC + + R +C +
Sbjct: 1045 EDQNQVYDNLDHVEKAIKKGQCLFSVSGKDFYPMHNFYRCITC------NSSDRNAICQS 1098
Query: 395 CSIACHENHDLVEL 436
C CHE H ++ L
Sbjct: 1099 CIERCHEGHTVMFL 1112
>AL132862-7|CAB70228.1| 129|Caenorhabditis elegans Hypothetical
protein Y73F8A.12 protein.
Length = 129
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 461 DCGNPKFKSHPCQFTPNKTDFNEDNIYNQN 550
DC F+ C FT NK F E ++ N N
Sbjct: 44 DCFTEDFQFFACSFTANKAQFVEKHLTNPN 73
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 3.5
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 11/153 (7%)
Frame = +2
Query: 188 DGEKVVTMLDVLQEQQDFEDDANAVLGASDEKNCTYSTGYIK-RQAIYACITC------- 343
D + + L +Q+ EDDA++ L +++ K + T +K + +++C C
Sbjct: 435 DSASLSVLEKALDQQKSSEDDASS-LCSNESKLLKFPTTPLKEEEGLFSCDQCDKVFGKQ 493
Query: 344 ---CPEAKDDQNQRAGVCLACSIACHENHDLVELYTKRNFRCDCGNPKFKSHPCQFTPNK 514
+ QR C C A H L E + R G F+ C
Sbjct: 494 SSLARHKYEHSGQRPYKCDICEKAFKHKHHLTE-----HKRLHSGEKPFQCDKC-----L 543
Query: 515 TDFNEDNIYNQNFSGLYCICHRPYPDPDATFED 613
F+ Y+Q+ + Y C +PY + A+ D
Sbjct: 544 KRFSHSGSYSQHMNHRYSYC-KPYREQPASPSD 575
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 3.5
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 11/153 (7%)
Frame = +2
Query: 188 DGEKVVTMLDVLQEQQDFEDDANAVLGASDEKNCTYSTGYIK-RQAIYACITC------- 343
D + + L +Q+ EDDA++ L +++ K + T +K + +++C C
Sbjct: 435 DSASLSVLEKALDQQKSSEDDASS-LCSNESKLLKFPTTPLKEEEGLFSCDQCDKVFGKQ 493
Query: 344 ---CPEAKDDQNQRAGVCLACSIACHENHDLVELYTKRNFRCDCGNPKFKSHPCQFTPNK 514
+ QR C C A H L E + R G F+ C
Sbjct: 494 SSLARHKYEHSGQRPYKCDICEKAFKHKHHLTE-----HKRLHSGEKPFQCDKC-----L 543
Query: 515 TDFNEDNIYNQNFSGLYCICHRPYPDPDATFED 613
F+ Y+Q+ + Y C +PY + A+ D
Sbjct: 544 KRFSHSGSYSQHMNHRYSYC-KPYREQPASPSD 575
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 3.5
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 11/153 (7%)
Frame = +2
Query: 188 DGEKVVTMLDVLQEQQDFEDDANAVLGASDEKNCTYSTGYIK-RQAIYACITC------- 343
D + + L +Q+ EDDA++ L +++ K + T +K + +++C C
Sbjct: 435 DSASLSVLEKALDQQKSSEDDASS-LCSNESKLLKFPTTPLKEEEGLFSCDQCDKVFGKQ 493
Query: 344 ---CPEAKDDQNQRAGVCLACSIACHENHDLVELYTKRNFRCDCGNPKFKSHPCQFTPNK 514
+ QR C C A H L E + R G F+ C
Sbjct: 494 SSLARHKYEHSGQRPYKCDICEKAFKHKHHLTE-----HKRLHSGEKPFQCDKC-----L 543
Query: 515 TDFNEDNIYNQNFSGLYCICHRPYPDPDATFED 613
F+ Y+Q+ + Y C +PY + A+ D
Sbjct: 544 KRFSHSGSYSQHMNHRYSYC-KPYREQPASPSD 575
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +2
Query: 344 CPEAKDDQNQRAGVCLACSIACHENHDLVELYTKRNFRCDCGNPKFKSHPCQFTPNKTDF 523
C + R V S+ C EN+ +V L T C PK + PC + F
Sbjct: 499 CAKTDCPSGYRCSVVQHSSVCCPENNKVVGLQTSGARATRCSLPKERG-PCDKYELRFYF 557
Query: 524 NED 532
N D
Sbjct: 558 NAD 560
>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
protein F10G7.10c protein.
Length = 1824
Score = 27.5 bits (58), Expect = 8.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 410 HENHDLVELYTKRNFRCDCGN 472
H HD +++ CDCGN
Sbjct: 173 HAGHDYTRFFSREGGACDCGN 193
>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
protein F10G7.10a protein.
Length = 2025
Score = 27.5 bits (58), Expect = 8.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 410 HENHDLVELYTKRNFRCDCGN 472
H HD +++ CDCGN
Sbjct: 173 HAGHDYTRFFSREGGACDCGN 193
>U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical
protein F10G7.10b protein.
Length = 1884
Score = 27.5 bits (58), Expect = 8.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 410 HENHDLVELYTKRNFRCDCGN 472
H HD +++ CDCGN
Sbjct: 173 HAGHDYTRFFSREGGACDCGN 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,198,000
Number of Sequences: 27780
Number of extensions: 315421
Number of successful extensions: 933
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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