Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k14
         (261 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   0.95 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   3.8  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    20   5.0  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    20   5.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   6.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       19   8.8  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 0.95
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 172 KKRGRPPAATRTKDSAKSSDDEQA 243
           K+R    AA R++D+ ++ +DE A
Sbjct: 141 KRRKNNEAAKRSRDARRAKEDEIA 164


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 109 VEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 240
           V++ G+ +P+    + ES E K    P  + + KDS+  S+DE+
Sbjct: 70  VQQAGK-KPENVKKEDESDEEK----PTTSFKLKDSSSDSEDER 108


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 255 FSYWCLFIIRRLSRIFC 205
           + ++C FII  +  +FC
Sbjct: 167 YHFFCAFIIFTMHLLFC 183



 Score = 19.8 bits (39), Expect = 5.0
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -1

Query: 255 FSYWCLFIIRRLSRIFCSGGSWRPTSFFKFFRL 157
           + ++C  II      FC      PT F+  F L
Sbjct: 286 YYFYCALIILLCIYYFCRAFIIFPTHFYCAFSL 318


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 134 QKPMEHNLSRKN 169
           ++P  HNL RKN
Sbjct: 77  REPQLHNLCRKN 88


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 134 QKPMEHNLSRKN 169
           ++P  HNL RKN
Sbjct: 77  REPQLHNLCRKN 88


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +1

Query: 88  SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPA 195
           S  G  +++   RG+     +  +   L K G PP+
Sbjct: 199 SPPGDGILDFSKRGQKSDADSDSDVVNLSKPGTPPS 234


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 2   INSHGNSGIXCCKQ 43
           +NSHG      CKQ
Sbjct: 193 VNSHGKIKTFKCKQ 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,644
Number of Sequences: 336
Number of extensions: 998
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4164927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)