Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k12
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   0.77 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = -1

Query: 431 FYHSWGFVLLQKAVHR 384
           FY S+GF+++Q+ +H+
Sbjct: 322 FYWSFGFLIIQRFIHQ 337


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 494 GI*NWSVPSTS 462
           G+ NW++PSTS
Sbjct: 437 GMMNWNMPSTS 447


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 484 IGLYPVHLQTL 452
           +GLYP +LQT+
Sbjct: 20  LGLYPSYLQTV 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,122
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)