Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k12
(557 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 126 2e-29
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 124 4e-29
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 124 4e-29
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 121 4e-28
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 120 8e-28
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 95 4e-20
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 60 2e-09
06_01_0044 + 415462-416058 31 0.62
10_01_0141 - 1686827-1687063,1687160-1687315,1688046-1688974,168... 29 1.9
03_05_0691 + 26788372-26788459,26788635-26788703,26789355-267895... 29 3.3
12_02_1285 - 27550548-27550709,27551473-27551516,27551588-275516... 28 5.8
11_06_0168 + 20868696-20870072 27 7.7
>03_04_0157 +
17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 126 bits (303), Expect = 2e-29
Identities = 72/172 (41%), Positives = 103/172 (59%), Gaps = 19/172 (11%)
Frame = +3
Query: 54 VNGCKYTVGNEVSSEVMLLDYLREYLQLRGTKYMCRQAGCGACIVAAKRPDRRTNE---- 221
VNG + + + ++ + LL YLR+ + L GTK C + GCGAC V D+ T +
Sbjct: 26 VNGVRRVLPDGLA-HLTLLQYLRD-IGLPGTKLGCGEGGCGACTVMVSCYDQTTKKTQHF 83
Query: 222 AVNSCMVPITSCQNWEITTIEGVGNRNKGY-------------HPLQKS-LAANNGSQCG 359
A+N+C+ P+ S + I T+EG+GNR + L+K LA +GSQCG
Sbjct: 84 AINACLAPLYSVEGMHIITVEGIGNRQRAVWNYLCDEVVTCWLKTLRKERLAMAHGSQCG 143
Query: 360 YCSPGWVMSMYSLLQQYKAPRMIE-IEKLLGSNVCRCTGYRPILDAFKSFAK 512
+C+PG+VMSMY+LL+ + P E IE L N+CRCTGYRPI+DAF+ F+K
Sbjct: 144 FCTPGFVMSMYALLRSSEQPPTEEQIEDSLAGNLCRCTGYRPIIDAFRVFSK 195
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 124 bits (300), Expect = 4e-29
Identities = 72/184 (39%), Positives = 101/184 (54%), Gaps = 18/184 (9%)
Frame = +3
Query: 54 VNGCKY-TVGNEVSSEVMLLDYLREYLQLRGTKYMCRQAGCGACIVAAKRPDRRTNE--- 221
VNG +Y VG V LL++LR +RG K C + GCGAC+V + D +E
Sbjct: 15 VNGERYEAVG--VDPSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVVSKYDAVADEVTE 72
Query: 222 -AVNSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAANNGSQCGYCSPGWVMSMYSL 398
+ +SC+ + S + +TT EG+GN G+H +Q+ L+ + SQCG+C+PG MS+YS
Sbjct: 73 FSASSCLTLLGSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFCTPGMCMSIYSA 132
Query: 399 LQQ-------------YKAPRMIEIEKLLGSNVCRCTGYRPILDAFKSFAKDAPKNLISD 539
L + + E EK + N+CRCTGYRPI+DA KSFA D D
Sbjct: 133 LAKADRCSSRPSPPPGFSKLTAAEAEKAVSGNLCRCTGYRPIVDACKSFAADV------D 186
Query: 540 IEDL 551
+EDL
Sbjct: 187 LEDL 190
>03_06_0252 -
32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 124 bits (300), Expect = 4e-29
Identities = 72/184 (39%), Positives = 101/184 (54%), Gaps = 18/184 (9%)
Frame = +3
Query: 54 VNGCKY-TVGNEVSSEVMLLDYLREYLQLRGTKYMCRQAGCGACIVAAKRPDRRTNE--- 221
VNG +Y VG V LL++LR +RG K C + GCGAC+V + D +E
Sbjct: 16 VNGERYEAVG--VDPSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVVSKYDAVADEVTE 73
Query: 222 -AVNSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAANNGSQCGYCSPGWVMSMYSL 398
+ +SC+ + S + +TT EG+GN G+H +Q+ L+ + SQCG+C+PG MS+YS
Sbjct: 74 FSASSCLTLLGSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFCTPGMCMSIYSA 133
Query: 399 LQQ-------------YKAPRMIEIEKLLGSNVCRCTGYRPILDAFKSFAKDAPKNLISD 539
L + + E EK + N+CRCTGYRPI+DA KSFA D D
Sbjct: 134 LAKADKASGRPAPPTGFSKITAAEAEKAVSGNLCRCTGYRPIVDACKSFAADV------D 187
Query: 540 IEDL 551
+EDL
Sbjct: 188 LEDL 191
>07_01_1146 +
10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 121 bits (291), Expect = 4e-28
Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 17/190 (8%)
Frame = +3
Query: 33 MDRIQFKVNGCKYTVGN-EVSSEVMLLDYLREYLQLRGTKYMCRQAGCGACIVAAKRPDR 209
++R+ F +NG + V +V LL+++R +G K C + GCGAC++ + +
Sbjct: 12 VERVVFALNGERQEVAAADVDPSTTLLEFIRTRTPFKGPKLGCGEGGCGACVILIAKYNP 71
Query: 210 RTNEAV----NSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAANNGSQCGYCSPGW 377
+T+E +SC+ + S I T EG+GN G+H +QK ++ + SQCG+C+PG
Sbjct: 72 KTDEVTEFNASSCLTLLYSIHFCSIITTEGLGNTKDGFHAIQKRMSGFHASQCGFCTPGM 131
Query: 378 VMSMYSLL---QQYKAP---------RMIEIEKLLGSNVCRCTGYRPILDAFKSFAKDAP 521
MS++S L + K P + E E+ N+CRCTGYRPI+DA KSFA D
Sbjct: 132 CMSIFSSLVNADKSKKPDPPKGFSKLSVSEAERSFSGNMCRCTGYRPIVDACKSFASDV- 190
Query: 522 KNLISDIEDL 551
D+EDL
Sbjct: 191 -----DLEDL 195
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 120 bits (289), Expect = 8e-28
Identities = 71/188 (37%), Positives = 100/188 (53%), Gaps = 22/188 (11%)
Frame = +3
Query: 54 VNGCKY-TVGNEVSSEVMLLDYLREYLQLRGTKYMCRQAGCGACIVAAKRPDRRTNE--- 221
VNG +Y VG V + LL++LR RG K C + GCGAC V + D +E
Sbjct: 10 VNGERYEAVG--VDPSMTLLEFLRTRTPFRGPKLGCGEGGCGACAVVVSKYDAAADEVTS 67
Query: 222 -AVNSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAANNGSQCGYCSPGWVMSMYSL 398
+ +SC+ + S + +TT EG+GN G+HP+Q+ LA + SQCG+C+PG +S++S
Sbjct: 68 FSASSCLTLLGSLHHCAVTTSEGIGNSRDGFHPVQRRLAGFHASQCGFCTPGMCVSIFSA 127
Query: 399 LQQ-----------------YKAPRMIEIEKLLGSNVCRCTGYRPILDAFKSFAKDAPKN 527
L + + E+ + N+CRCTGYRPILDA KSFA D
Sbjct: 128 LANADRAASAAPPPPPTPPGFSRLTAADAERAVSGNLCRCTGYRPILDACKSFAADV--- 184
Query: 528 LISDIEDL 551
D+EDL
Sbjct: 185 ---DLEDL 189
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 94.7 bits (225), Expect = 4e-20
Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Frame = +3
Query: 168 GCGACIVAAKRPDRRTNE----AVNSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLA 335
GCGAC+V D +E AV+SC+ + +TT EG+G+ +G H L + LA
Sbjct: 73 GCGACVVVVSAYDAEADEVAHAAVSSCLTLARGLHHRAVTTTEGLGSSRRGLHALHERLA 132
Query: 336 ANNGSQCGYCSPGWVMSMYSLL--------------QQYKAPRMIEIEKLLGSNVCRCTG 473
+ SQCG+C+PG MS+ L + + E E+ + N+CRCTG
Sbjct: 133 GFHASQCGFCTPGVCMSLAGALAAAEGNGKKAASAAEGFSRLTAAEAERAVAGNLCRCTG 192
Query: 474 YRPILDAFKSFAKDAPKNLISDIEDL 551
YRPI DA KSFA D D+EDL
Sbjct: 193 YRPIADACKSFAADV------DLEDL 212
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Frame = +3
Query: 342 NGSQCGYCSPGWVMSMYSLL---QQYKAPR---------MIEIEKLLGSNVCRCTGYRPI 485
+ SQCG+C+PG MS++S L + K P + E E+ N+CRCTGYRPI
Sbjct: 5 HASQCGFCTPGMCMSIFSSLVNADKSKKPAPPKGFSKLSISEAERSFSGNMCRCTGYRPI 64
Query: 486 LDAFKSFAKDAPKNLISDIEDL 551
+DA KSF D D+EDL
Sbjct: 65 VDACKSFESDV------DLEDL 80
>06_01_0044 + 415462-416058
Length = 198
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 333 AANNGSQCGYCSPGWVM---SMYSLLQQYKAPRMIEIEKL 443
AA NG+ C +C PG V+ Y QQ+K + I+KL
Sbjct: 155 AAANGNDCAFCPPGRVLHPAEFYCGKQQHKDELNLSIQKL 194
>10_01_0141 -
1686827-1687063,1687160-1687315,1688046-1688974,
1689595-1689640,1689914-1689932,1690751-1690962,
1691063-1691218,1692240-1693184,1693448-1693597
Length = 949
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 553 TKSSISEIRFFGASLAKDLKASKIGLYPVHLQTLDPSSFS 434
T SS R+ +L K + + +YP HL LD SSF+
Sbjct: 641 TTSSADTNRWISHALQKQARVLEAVMYPCHLLDLDHSSFT 680
>03_05_0691 +
26788372-26788459,26788635-26788703,26789355-26789528,
26790347-26790478,26791730-26791869,26791966-26792073,
26792222-26792347,26792569-26792733,26793085-26793186,
26794519-26794689,26794773-26794852,26795130-26795193
Length = 472
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 186 VAAKRPDRRTNEAVNSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAANNGS 350
+AAK R+ E + C +PI NW T+EG+ K +K+ A + S
Sbjct: 287 IAAKSGRRKLVEILFPCTLPIKGVSNW---TVEGIITHVKSKKSKKKACAQDKES 338
>12_02_1285 -
27550548-27550709,27551473-27551516,27551588-27551651,
27551733-27552463,27552754-27552798,27553663-27554167
Length = 516
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 358 PHWLPLLAARLFCKGWYPLFLFPTPSM 278
P W+ L+ L GW+P LF T M
Sbjct: 293 PVWMVLIVTALTWIGWFPFILFDTDWM 319
>11_06_0168 + 20868696-20870072
Length = 458
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 343 LLAARLFCKGWYPLFLFPTPSMV 275
++A RLF K P+FL P PSM+
Sbjct: 430 IVAPRLFLKCRAPVFLVPNPSMM 452
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,626,021
Number of Sequences: 37544
Number of extensions: 349305
Number of successful extensions: 847
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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