Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k12
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr... 142 1e-34
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ... 136 1e-32
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p... 133 7e-32
Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical p... 29 1.7
Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 6.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 6.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 6.9
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
protein F55B11.1 protein.
Length = 1358
Score = 142 bits (345), Expect = 1e-34
Identities = 71/165 (43%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Frame = +3
Query: 30 DMDRIQFKVNGCKYTVGNEVSSEVMLLDYLREYLQLRGTKYMCRQAGCGACIVAAKRPDR 209
D + F VNG K +V ++ L YLR+ L+L GTK C + GCGAC + +
Sbjct: 12 DATNLVFYVNG-KRVEEKDVDPKMTLATYLRDKLKLTGTKIGCNEGGCGACTIMISHIEN 70
Query: 210 RTNE--AVNSCMVPITSCQNWEITTIEGVGNRNKG-YHPLQKSLAANNGSQCGYCSPGWV 380
+ + NSC++P+ +TT+EG+G+ K HP+Q+ LA +GSQCG+C+PG+V
Sbjct: 71 GEIKHFSANSCLMPVCGVFGKAVTTVEGIGSVAKNRLHPVQERLAKAHGSQCGFCTPGFV 130
Query: 381 MSMYSLLQQYKAPRMIEIEKLLGSNVCRCTGYRPILDAFKSFAKD 515
M+MY+LL+ P + +I L N+CRCTGYRPIL+AF SFA D
Sbjct: 131 MAMYALLRNNPNPTISDINLGLQGNLCRCTGYRPILEAFYSFAVD 175
>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
protein F15E6.6 protein.
Length = 1228
Score = 136 bits (329), Expect = 1e-32
Identities = 71/160 (44%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 42 IQFKVNGCKYTVGNEVSSEVMLLDYLREYLQLRGTKYMCRQAGCGACIVAAKRPDRRTNE 221
I F VNG K V E+ L YLR L LRGTK C + CG+C V D N+
Sbjct: 6 IFFNVNG-KDIKEENVDPELTLAYYLRNKLGLRGTKLGCEEGVCGSCTVVLGTWDDSLNK 64
Query: 222 AV----NSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAANNGSQCGYCSPGWVMSM 389
AV N+C+VP+ + T+EGVG+R+K HP+Q +A + QCG+CSPG+VMS
Sbjct: 65 AVYSAVNACLVPLFHVHKTFVITVEGVGSRDK-IHPIQDRMARGHAVQCGFCSPGFVMSA 123
Query: 390 YSLLQQYKAPRMIEIEKLLGSNVCRCTGYRPILDAFKSFA 509
Y+LL+ + P + +I + +N+CRCTGYRPIL+A SF+
Sbjct: 124 YALLRNHPNPTIEQINAAIRANLCRCTGYRPILEALYSFS 163
>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
protein B0222.9 protein.
Length = 1217
Score = 133 bits (322), Expect = 7e-32
Identities = 70/163 (42%), Positives = 96/163 (58%), Gaps = 4/163 (2%)
Frame = +3
Query: 42 IQFKVNGCKYTVGNEVSSEVMLLDYLREYLQLRGTKYMCRQAGCGACIVAAKRPDRRTNE 221
I F VNG N V E+ L YLR L LRGTK C + CG+C V D N+
Sbjct: 6 IFFNVNGKDVNEEN-VDPELTLAYYLRNKLGLRGTKLGCEEGVCGSCTVVLGTWDDCQNK 64
Query: 222 AV----NSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAANNGSQCGYCSPGWVMSM 389
AV N+C+VP+ + T+EGVG+R+K HP+Q +A + QCG+CSPG+VMS
Sbjct: 65 AVYRAVNACLVPLFHVHKTFVITVEGVGSRDK-IHPIQDRMARGHALQCGFCSPGFVMSA 123
Query: 390 YSLLQQYKAPRMIEIEKLLGSNVCRCTGYRPILDAFKSFAKDA 518
Y+L P + +I + +N+CRCTGYRPIL+A SF+ ++
Sbjct: 124 YALFSNQPNPTIQQINAAIRANLCRCTGYRPILEALYSFSSES 166
>Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical
protein W04A4.3 protein.
Length = 149
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 270 ITTIEGVGNRNKGYHPLQKSLAANNGSQCGYCSPGWVMSMYSLLQ 404
+T +G N YHPL NG+ C GW+ + LQ
Sbjct: 62 LTAKKGPKNLKMVYHPLSIGQKKGNGTAVATCENGWLECQLNKLQ 106
>Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 278 GCYFPILTGCYRDHARIDSFIRTTVRTFSCHYA--STATGLTTHVLSS 141
G YF T C H S +R TV+ C YA S GL +V +S
Sbjct: 59 GYYFTTATRCEDSHLSTVSTVRATVKESYCSYAILSVPEGLPFNVSTS 106
>Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 278 GCYFPILTGCYRDHARIDSFIRTTVRTFSCHYA--STATGLTTHVLSS 141
G YF T C H S +R TV+ C YA S GL +V +S
Sbjct: 59 GYYFTTATRCEDSHLSTVSTVRATVKESYCSYAILSVPEGLPFNVSTS 106
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/70 (25%), Positives = 26/70 (37%)
Frame = +3
Query: 162 QAGCGACIVAAKRPDRRTNEAVNSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAAN 341
Q C C K P N +N ++ + C W+ EG+ Y Q AA
Sbjct: 629 QGLCFPCASLRKCPRCERNYQLNEKLIRCSQCSKWQHGACEGL------YTDEQLEQAAI 682
Query: 342 NGSQCGYCSP 371
+ +C C P
Sbjct: 683 DRMRCSACRP 692
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/70 (25%), Positives = 26/70 (37%)
Frame = +3
Query: 162 QAGCGACIVAAKRPDRRTNEAVNSCMVPITSCQNWEITTIEGVGNRNKGYHPLQKSLAAN 341
Q C C K P N +N ++ + C W+ EG+ Y Q AA
Sbjct: 629 QGLCFPCASLRKCPRCERNYQLNEKLIRCSQCSKWQHGACEGL------YTDEQLEQAAI 682
Query: 342 NGSQCGYCSP 371
+ +C C P
Sbjct: 683 DRMRCSACRP 692
>Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical
protein F25H2.6 protein.
Length = 573
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 403 CKRLYIDITHPGEQ*PHWLPLLAARLFCKGWYPLFL 296
C +Y+ HPG W+P A R K YP FL
Sbjct: 524 CNIIYVSQVHPGG----WVPTAALRHVYKKEYPKFL 555
>Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.6 protein.
Length = 316
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 335 C*TFL*RVVSFIPISHSFYGCYFPILTGCYRD-HARIDSFIR 213
C +FL V F+ +SH F Y+P++T D H R F R
Sbjct: 247 CMSFL-SSVPFLSLSHVFLTAYWPLMTSLTLDVHIRAALFYR 287
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 204 PDV*LPLCKHRNRPDDTCT*FPSTGGTPSGSP 109
P LP + R P+D T P TG P+G P
Sbjct: 436 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRP 467
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 204 PDV*LPLCKHRNRPDDTCT*FPSTGGTPSGSP 109
P LP + R P+D T P TG P+G P
Sbjct: 457 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRP 488
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 204 PDV*LPLCKHRNRPDDTCT*FPSTGGTPSGSP 109
P LP + R P+D T P TG P+G P
Sbjct: 442 PPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRP 473
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 90 SSEVMLLDYLREYLQLR 140
S VM+LD L+EYLQLR
Sbjct: 734 SQMVMMLDILQEYLQLR 750
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,398,654
Number of Sequences: 27780
Number of extensions: 303432
Number of successful extensions: 775
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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