Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k11
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.72 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.72 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.9  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 5   LCFRLAGSWRVVSCRYTFAARYH 73
           L +RL   W +  C Y F  RY+
Sbjct: 217 LLYRLLRCWLISKCIYVFNPRYY 239


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 5   LCFRLAGSWRVVSCRYTFAARYH 73
           L +RL   W +  C Y F  RY+
Sbjct: 217 LLYRLLRCWLISKCIYVFNPRYY 239


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 526 ILHLKPQPILVSATTMMRNAYTLTINGYRSCCSSRAYF 639
           ++ ++ Q  +VS T  +RN   +  NG+R+   SR  F
Sbjct: 193 LIQIETQCEIVSDT--LRNLDKIVTNGFRNVAESRKIF 228


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 489 TFCWITYTFTMPN 527
           TF W TY F +PN
Sbjct: 154 TFGWHTYIFDVPN 166


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 8   CFRLAGSWRVVSCRYTFAARYHKSLHYNDTF 100
           C    G  ++  CR TF+A     + +++TF
Sbjct: 241 CCEKCGLKKIEFCRPTFSAARFYGIDFSNTF 271


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 534 SKTAAHPGLGDDNDEK 581
           S   AH  L DD+DEK
Sbjct: 188 SLNGAHTPLTDDHDEK 203


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 586 YTLTINGYRSCCSSRAY 636
           YT+  NGY S  SS +Y
Sbjct: 128 YTVISNGYSSPMSSGSY 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,385
Number of Sequences: 336
Number of extensions: 3385
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)