Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k09
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223391-1|BAD97111.1| 420|Homo sapiens DNA primase small subun... 194 3e-49
X74330-1|CAA52377.1| 420|Homo sapiens DNA primase (subunit p48)... 193 5e-49
BC005266-1|AAH05266.1| 420|Homo sapiens primase, polypeptide 1,... 193 5e-49
U89689-1|AAC51726.1| 50|Homo sapiens DNA primase 1 protein. 69 2e-11
Z35309-1|CAA84552.1| 1251|Homo sapiens adenylyl cyclase protein. 31 2.3
M83533-1|AAA35523.2| 675|Homo sapiens adenylyl cyclase type V p... 31 2.3
DQ104739-1|AAZ13596.1| 1120|Homo sapiens brain adenylate cyclase... 31 2.3
BC126435-1|AAI26436.1| 248|Homo sapiens apolipoprotein L domain... 31 4.0
BC126433-1|AAI26434.1| 248|Homo sapiens apolipoprotein L domain... 31 4.0
BC042478-1|AAH42478.1| 302|Homo sapiens APOLD1 protein protein. 31 4.0
AK057867-1|BAB71601.1| 248|Homo sapiens protein ( Homo sapiens ... 31 4.0
>AK223391-1|BAD97111.1| 420|Homo sapiens DNA primase small subunit,
49kDa variant protein.
Length = 420
Score = 194 bits (472), Expect = 3e-49
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 7/189 (3%)
Frame = +2
Query: 44 NENILSDMLPTYYARQFPQNIFCRWLACGSSPQPLC-NRELSFTLADDVYLRYLSISHQK 220
N L ++L YY R FP + + RWL G + +RE SFTL DD+Y+RY S ++Q
Sbjct: 5 NPTELPELLKLYYRRLFPYSQYYRWLNYGGVIKNYFQHREFSFTLKDDIYIRYQSFNNQS 64
Query: 221 DLQTLLQKKCPHKLDVGAVYNTKPSVGRHDAVVIS------RELVFDIDLTDYDEIRTCC 382
DL+ +QK P+K+D+GAVY+ +P+ +H+ V + +ELVFDID+TDYD++R CC
Sbjct: 65 DLEKEMQKMNPYKIDIGAVYSHRPN--QHNTVKLGAFQAQEKELVFDIDMTDYDDVRRCC 122
Query: 383 QEARVCEKCWKFMVIACEIIDKALKDDFGFQSILWVFSGRRGIHCWVSDYEARTLDSPGR 562
A +C KCW M +A IID+ALK+DFGF+ LWV+SGRRG+HCWV D R L S R
Sbjct: 123 SSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVR 182
Query: 563 GAIADYLCL 589
I +YL L
Sbjct: 183 SGIVEYLSL 191
>X74330-1|CAA52377.1| 420|Homo sapiens DNA primase (subunit p48)
protein.
Length = 420
Score = 193 bits (470), Expect = 5e-49
Identities = 90/185 (48%), Positives = 123/185 (66%), Gaps = 7/185 (3%)
Frame = +2
Query: 56 LSDMLPTYYARQFPQNIFCRWLACGSSPQPLC-NRELSFTLADDVYLRYLSISHQKDLQT 232
L ++L YY R FP + + RWL G + +RE SFTL DD+Y+RY S ++Q DL+
Sbjct: 9 LPELLKLYYRRLFPYSQYYRWLNYGGVIKNYFQHREFSFTLKDDIYIRYQSFNNQSDLEK 68
Query: 233 LLQKKCPHKLDVGAVYNTKPSVGRHDAVVIS------RELVFDIDLTDYDEIRTCCQEAR 394
+QK P+K+D+GAVY+ +P+ +H+ V + +ELVFDID+TDYD++R CC A
Sbjct: 69 EMQKMNPYKIDIGAVYSHRPN--QHNTVKLGAFQAQEKELVFDIDMTDYDDVRRCCSSAD 126
Query: 395 VCEKCWKFMVIACEIIDKALKDDFGFQSILWVFSGRRGIHCWVSDYEARTLDSPGRGAIA 574
+C KCW M +A IID+ALK+DFGF+ LWV+SGRRG+HCWV D R L S R I
Sbjct: 127 ICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGIV 186
Query: 575 DYLCL 589
+YL L
Sbjct: 187 EYLSL 191
>BC005266-1|AAH05266.1| 420|Homo sapiens primase, polypeptide 1,
49kDa protein.
Length = 420
Score = 193 bits (470), Expect = 5e-49
Identities = 90/185 (48%), Positives = 123/185 (66%), Gaps = 7/185 (3%)
Frame = +2
Query: 56 LSDMLPTYYARQFPQNIFCRWLACGSSPQPLC-NRELSFTLADDVYLRYLSISHQKDLQT 232
L ++L YY R FP + + RWL G + +RE SFTL DD+Y+RY S ++Q DL+
Sbjct: 9 LPELLKLYYRRLFPYSQYYRWLNYGGVIKNYFQHREFSFTLKDDIYIRYQSFNNQSDLEK 68
Query: 233 LLQKKCPHKLDVGAVYNTKPSVGRHDAVVIS------RELVFDIDLTDYDEIRTCCQEAR 394
+QK P+K+D+GAVY+ +P+ +H+ V + +ELVFDID+TDYD++R CC A
Sbjct: 69 EMQKMNPYKIDIGAVYSHRPN--QHNTVKLGAFQAQEKELVFDIDMTDYDDVRRCCSSAD 126
Query: 395 VCEKCWKFMVIACEIIDKALKDDFGFQSILWVFSGRRGIHCWVSDYEARTLDSPGRGAIA 574
+C KCW M +A IID+ALK+DFGF+ LWV+SGRRG+HCWV D R L S R I
Sbjct: 127 ICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGIV 186
Query: 575 DYLCL 589
+YL L
Sbjct: 187 EYLSL 191
>U89689-1|AAC51726.1| 50|Homo sapiens DNA primase 1 protein.
Length = 50
Score = 68.5 bits (160), Expect = 2e-11
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2
Query: 326 RELVFDIDLTDYDEIRTCCQEARVCEKCWKFMVIACEIIDKAL 454
+ELVFDID+TDYD++R CC A +C KCW M +A IID+AL
Sbjct: 8 KELVFDIDMTDYDDVRRCCSSADICPKCWTLMTMAIRIIDRAL 50
>Z35309-1|CAA84552.1| 1251|Homo sapiens adenylyl cyclase protein.
Length = 1251
Score = 31.5 bits (68), Expect = 2.3
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 23 VKMIGEHNENILSDMLPTYYARQF 94
+K + EHNEN+L ++LP++ AR F
Sbjct: 940 MKELREHNENMLRNILPSHVARHF 963
>M83533-1|AAA35523.2| 675|Homo sapiens adenylyl cyclase type V
protein.
Length = 675
Score = 31.5 bits (68), Expect = 2.3
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 23 VKMIGEHNENILSDMLPTYYARQF 94
+K + EHNEN+L ++LP++ AR F
Sbjct: 364 MKELREHNENMLRNILPSHVARHF 387
>DQ104739-1|AAZ13596.1| 1120|Homo sapiens brain adenylate cyclase 8
protein.
Length = 1120
Score = 31.5 bits (68), Expect = 2.3
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 23 VKMIGEHNENILSDMLPTYYARQF 94
+K + EHNEN+L ++LP++ AR F
Sbjct: 809 MKELREHNENMLRNILPSHVARHF 832
>BC126435-1|AAI26436.1| 248|Homo sapiens apolipoprotein L domain
containing 1 protein.
Length = 248
Score = 30.7 bits (66), Expect = 4.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 107 FCRWLACGSSPQPLCNRELSFTLADDVY 190
FCRW CG C R S L + VY
Sbjct: 141 FCRWQGCGDRQLLQCGRNASIALYNSVY 168
>BC126433-1|AAI26434.1| 248|Homo sapiens apolipoprotein L domain
containing 1 protein.
Length = 248
Score = 30.7 bits (66), Expect = 4.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 107 FCRWLACGSSPQPLCNRELSFTLADDVY 190
FCRW CG C R S L + VY
Sbjct: 141 FCRWQGCGDRQLLQCGRNASIALYNSVY 168
>BC042478-1|AAH42478.1| 302|Homo sapiens APOLD1 protein protein.
Length = 302
Score = 30.7 bits (66), Expect = 4.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 107 FCRWLACGSSPQPLCNRELSFTLADDVY 190
FCRW CG C R S L + VY
Sbjct: 195 FCRWQGCGDRQLLQCGRNASIALYNSVY 222
>AK057867-1|BAB71601.1| 248|Homo sapiens protein ( Homo sapiens
cDNA FLJ25138 fis, clone CBR07057. ).
Length = 248
Score = 30.7 bits (66), Expect = 4.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 107 FCRWLACGSSPQPLCNRELSFTLADDVY 190
FCRW CG C R S L + VY
Sbjct: 141 FCRWQGCGDRQLLQCGRNASIALYNSVY 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,736,909
Number of Sequences: 237096
Number of extensions: 1798254
Number of successful extensions: 3386
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3380
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -