Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k08
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.7  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   8.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 366 VDPLK*LFFNNVLNSLCNFFE 304
           V+ L  LF N++L+ +C+ FE
Sbjct: 195 VNALDHLFLNDILSDICDKFE 215


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 366 VDPLK*LFFNNVLNSLCNFFE 304
           V+ L  LF N++L+ +C+ FE
Sbjct: 151 VNALDHLFLNDILSDICDKFE 171


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +1

Query: 535 YSYNSXR-NTLY-FNTIYSNY*NHQK 606
           Y +N  + N  Y +N  YSNY N+Q+
Sbjct: 204 YQFNDPQFNFNYQYNQAYSNYNNYQE 229


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +1

Query: 535 YSYNSXR-NTLY-FNTIYSNY*NHQK 606
           Y +N  + N  Y +N  YSNY N+Q+
Sbjct: 224 YQFNDPQFNFNYQYNQAYSNYNNYQE 249


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 507 PYNINLSHRGIDKDKDIVKCLVLVKIYG 424
           P  + + H G    ++  K  VLV IYG
Sbjct: 21  PQRLRIRHHGDKPPQERPKVPVLVWIYG 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,163
Number of Sequences: 336
Number of extensions: 1741
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)