Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k06
(659 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.11
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 31 0.15
SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyce... 29 0.78
SPBC21B10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 1.4
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 1.8
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 27 2.4
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 27 2.4
SPMIT.04 |cox3||cytochrome c oxidase 3|Schizosaccharomyces pombe... 26 4.2
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 26 4.2
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 26 5.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 5.5
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 25 7.3
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 7.3
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 9.7
SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.7
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 25 9.7
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.5 bits (68), Expect = 0.11
Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 3/156 (1%)
Frame = +2
Query: 152 PRQMPEYIEGPRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASR 331
P P E P V+ P P +P+ +P + E P + + P V P +
Sbjct: 517 PPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQ 576
Query: 332 IINQPVITETPC---NSVAPRVPSATIITDCTPTVCKNLANTIQLMIICNLLQNTKGGPE 502
PV E P VAP VP A + P V +A + + + P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQ--PPVAP-VAPEVPSVPQRPAVPVVPEAPS 633
Query: 503 LALQLASPVLNEVFTSPVFSCGCPNPFSPNVVSPKA 610
+ A+PV+ EV + P P +P+V P A
Sbjct: 634 VPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPA 669
Score = 28.7 bits (61), Expect = 0.78
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 182 PRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASRIINQP---VI 352
P+ P + E P + P +P + P+ +P V E+P + + + P +
Sbjct: 515 PQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSV 574
Query: 353 TETPCNSVAPRVPS 394
+ P VAP VPS
Sbjct: 575 PQPPVAPVAPEVPS 588
Score = 25.4 bits (53), Expect = 7.3
Identities = 22/92 (23%), Positives = 35/92 (38%)
Frame = +2
Query: 152 PRQMPEYIEGPRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASR 331
P P E P V P P P+ P + E P + + P P + +
Sbjct: 592 PPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQ 651
Query: 332 IINQPVITETPCNSVAPRVPSATIITDCTPTV 427
PV+ E P P+ P+A ++ + P+V
Sbjct: 652 RPAVPVVPEAPS---VPQPPAAPVVPE-VPSV 679
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 31.1 bits (67), Expect = 0.15
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -3
Query: 552 GEVKTSFSTGDANCKANSGPPFVF---CSKLQMIINWIVLAKFLQTVGVQSVIIVADGTL 382
G +K+ FST + + + N P F ++L ++I ++L+ FL + Q+VI A T+
Sbjct: 59 GSLKSRFSTHEISSEKNDSPDFTLVLPSNRLYIVIPGLMLSIFLAALD-QTVITTAIPTI 117
Query: 381 GATLLHGVS 355
A L G S
Sbjct: 118 VANLDGGSS 126
>SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 219
Score = 28.7 bits (61), Expect = 0.78
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 335 INQPVITET---PCNSVAPRVPSATIITDCTPTVCKNLANTIQLMIICNLLQNTKGGPEL 505
I PV+T C ++A + S I D VC + T+Q M I +GGP+
Sbjct: 29 IRDPVLTSEGIEQCEALAKELESKQIPID--GIVCSPMRRTLQTMEIALKKYLAEGGPDK 86
Query: 506 ALQLASPVLNEV 541
SP EV
Sbjct: 87 VPVYISPFFQEV 98
>SPBC21B10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 198
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +2
Query: 23 HLSINYLI*RKNMSKFVLLLISMTIFDKTAKSQYLRQQPYSITPRQMPEYIEGPRVYDGP 202
H+ I +I +K +L L+S + + KS+ + Y + P+YI G +YD
Sbjct: 8 HVYIAKIIGKKGEGDKILDLLSK-VNEHVLKSEPFTKTYYFARDAKNPDYIFGLELYDSK 66
Query: 203 RIFEGPRFYDSPRL 244
+ E +P L
Sbjct: 67 EVLENSHKTSNPFL 80
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 323 ASRIINQPVITETPCNSVAPRVPSATIITDCTPTVCKNLANT-IQLMIICNLL 478
+S + N PV T TP + R PS ++ + +++A++ Q+ II N L
Sbjct: 310 SSSVTNSPVDTHTPSTPIMSRPPSMKALSSGVESQDESVASSNFQVPIISNPL 362
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 27.1 bits (57), Expect = 2.4
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 362 PCNSVAPRVPSATIITDCTPTVCKNLANTIQLMIICNLLQNTKGGPELALQLASPVLNE 538
P NS+ R T T + C N+A I + + +LLQ+ G A+PVLNE
Sbjct: 508 PSNSLVDRTLDQTCTV--TRSGCANIATAIAVELFVSLLQHPNGH-------AAPVLNE 557
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 251 SPRLIEGPRLIESPRVIESPRIYEASRIINQPVITETPCNSVAPRVPSA 397
SP+ I+ P IE+P IESP + + + + ++ S+ + P A
Sbjct: 106 SPQFIDKPSNIETPVKIESPHVSQNNTFQSYSELSPNVETSLTMKTPPA 154
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 233 SPRLIESPRLIEGPRLIESPRVIES 307
SP+ I+ P IE P IESP V ++
Sbjct: 106 SPQFIDKPSNIETPVKIESPHVSQN 130
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 218 PRFYDSPRLIESPRLIEGPRLIES 289
P+F D P IE+P IE P + ++
Sbjct: 107 PQFIDKPSNIETPVKIESPHVSQN 130
>SPMIT.04 |cox3||cytochrome c oxidase 3|Schizosaccharomyces
pombe|chr mitochondrial|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 378 ATLLHGVSVITGWLMILDASY 316
AT LHG+ +I G +++L A+Y
Sbjct: 212 ATGLHGIHIIVGTILLLVATY 232
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 266 EGPRLIESPRVIE-SPRIYEASRIINQPVITETPCNSVAPRVPSATIITDCTPTVCKNLA 442
+GP +I SP+VI S + +A + ++ + +P +S +P S ++D TV ++
Sbjct: 269 KGPNIISSPQVINASSPVRKAGKKKSKKALPTSPLSSSSPDA-SYNSVSDSFHTVAASVP 327
Query: 443 NTI 451
++
Sbjct: 328 ESL 330
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 534 FSTGDANCKANSGPPFVFCSKLQMIINWIVLAKFLQTVGVQSVIIVADG 388
F+ D NSG P + S++ +NW V F+ + V V +G
Sbjct: 426 FTGDDTKIMLNSGAPPLKRSRITRNLNWNVYLNFIILFSMCFVCAVVEG 474
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 368 NSVAPRVPSATIITDCTPTVCKNLAN 445
N VAP +P+ T + + T V +NL N
Sbjct: 1660 NLVAPMIPNNTELNEDTSAVSRNLEN 1685
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 403 NYGLHSDRLQELGQHNPVNDHL*FTT 480
N +H +RLQE + ++D+ +TT
Sbjct: 289 NNKMHKERLQEFSSYKNIDDYYDYTT 314
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 56 NMSKFVLLLISMTI--FDKTAKSQYLRQQPYSITPRQMPEY 172
N+ + V+LL+S+ F+K + LR P SIT + Y
Sbjct: 787 NLEESVMLLLSLATSDFEKVDLTSLLRSDPISITVELLQLY 827
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 548 SPVFSCGCPNPFSPNVVS--PKAVSPSMVP 631
SP+ S P PFSPNV S A P+ VP
Sbjct: 305 SPLPSAAPPIPFSPNVSSHPHMAFLPATVP 334
>SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 361 TMQQCRSKGSIGHDNYGLHSDRLQELGQHN 450
T + + +G G +NY S++LQE+ H+
Sbjct: 115 TEDEIQDEGYSGFENYVEESEKLQEIYHHS 144
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 570 QPHEKTGEVKTSFSTGDANCKANSGPP 490
+PH K G TS D N +NS PP
Sbjct: 430 EPHPKDGTNSTSSLPLDTNNLSNSEPP 456
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,544,798
Number of Sequences: 5004
Number of extensions: 53089
Number of successful extensions: 173
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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