Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k06
(659 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65620.1 68418.m08255 peptidase M3 family protein / thimet ol... 32 0.39
At1g33560.1 68414.m04153 disease resistance protein (CC-NBS-LRR ... 31 0.90
At3g02210.1 68416.m00202 phytochelatin synthetase family protein... 30 1.2
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 30 1.6
At1g66220.1 68414.m07516 subtilase family protein contains simil... 29 2.1
At5g15420.1 68418.m01805 expressed protein 29 3.6
At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4) i... 28 4.8
At2g41720.2 68415.m05156 pentatricopeptide (PPR) repeat-containi... 28 4.8
At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containi... 28 4.8
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 28 4.8
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 28 6.3
At2g35610.1 68415.m04365 expressed protein 28 6.3
At1g08370.1 68414.m00926 hydroxyproline-rich glycoprotein family... 28 6.3
At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family... 27 8.4
At4g34540.1 68417.m04908 isoflavone reductase family protein sim... 27 8.4
At4g21650.1 68417.m03137 subtilase family protein contains Pfam ... 27 8.4
At3g28830.1 68416.m03597 expressed protein 27 8.4
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 8.4
>At5g65620.1 68418.m08255 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P27237
Oligopeptidase A (EC 3.4.24.70) {Salmonella
typhimurium}; contains Pfam profile PF01432: Peptidase
family M3
Length = 791
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 86 SMTIFDKTAKSQYLRQQPYSITPRQMPEYIEGPRVYDG 199
SMT +D T S+ LR+ Y I ++ Y P+V DG
Sbjct: 425 SMTHWDTTFWSERLRESKYDINEEELRPYFSLPKVMDG 462
>At1g33560.1 68414.m04153 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 787
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 230 DSPRLIESPRLIEGPRLIESPRVIESPRIYEASRIINQPV-ITETPC 367
+S + PR++E P+ + + + +E R+Y +I+ PV + E PC
Sbjct: 654 NSLSITNCPRILELPKNLSNVQSLERLRLYACPELISLPVEVCELPC 700
>At3g02210.1 68416.m00202 phytochelatin synthetase family protein /
COBRA cell expansion protein COBL3 similar to
phytochelatin synthetase [Hordeum vulgare subsp.
vulgare] GI:29570314; identified in Roudier, et al,
Plant Phys. (2002) 130:538-548 (PMID:12376623);
supported by cDNA: gi|26452134|dbj|AK118555.1; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 452
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 497 PELALQLASPVLNEVFTSPVFSCGCPNPFSP-NVVSPKAVS-PSMVPN 634
P + L+S + + P SCGC N P N V PK S++PN
Sbjct: 228 PTCCVSLSSFYNKTIVSCPTCSCGCRNTSQPGNCVDPKGPRIASVIPN 275
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 185 RVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASR 331
RV PR F PR +SPR SPR +E P VI++ +E+ R
Sbjct: 97 RVPASPRAFVYPRSVESPR-FGSPRSVESPCFGSPIGVIDTASPFESVR 144
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 182 PRVYDGPRIFEGPRFYDSPRLIESPRLIEGPRLIESPRVIESPR 313
PR + PR E PRF SPR +ESP +I++ ES R
Sbjct: 102 PRAFVYPRSVESPRF-GSPRSVESPCFGSPIGVIDTASPFESVR 144
Score = 27.9 bits (59), Expect = 6.3
Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 233 SPRLI--ESPRLIEGPRLIESPRVIESPRIYEASRIINQP---VITETPCNSVAPRVPSA 397
SPRL SPR PR +ESPR SPR E S P + T +P SV V
Sbjct: 93 SPRLRVPASPRAFVYPRSVESPR-FGSPRSVE-SPCFGSPIGVIDTASPFESVREAVSKF 150
Query: 398 TIITD 412
ITD
Sbjct: 151 GGITD 155
>At1g66220.1 68414.m07516 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]; contains Pfam profiles: PF00082 Subtilase
family (3 copies)
Length = 753
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +2
Query: 323 ASRIINQPVITETPCNSVAPRVPSATIITDCTPTVCKNLANTIQLMIICNLLQNTKGGPE 502
A I Q VI T C+SV VP A + + + + T+ + K P
Sbjct: 431 AGIIYAQSVIDPTVCSSVD--VPCAVVDYEYGTDILYYMQTTV--------VPKAKLSPS 480
Query: 503 LALQLASPVLNEVFTSPVFSCGCPNPFSPNVVSPKAVSPSM 625
L + P+ + V P FSC PN SP ++ P +P +
Sbjct: 481 KTL-IGRPIASRV---PRFSCRGPNSVSPAILKPDIAAPGV 517
>At5g15420.1 68418.m01805 expressed protein
Length = 159
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 221 RFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASRIINQ-PVITETPCNSVAP 382
+F +LI+ +L+E RL++ ++ + ++ + SR++ + P+I + P P
Sbjct: 36 QFAQKSQLIDRRQLVERSRLVKIIQLAQKSQLIDTSRLVERSPLIEDHPARPEEP 90
>At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4)
identical to SUVH4 [Arabidopsis thaliana] GI:13517749;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH4 (SUVH4) GI:13517748
Length = 624
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 317 YEASRIINQPVITETPCNSVAPRVPSATIITDCTPTVCKNLANTIQ 454
Y R+ QP +T N VA R+P++T ++ VC++++ ++
Sbjct: 298 YRLKRLEGQPELTTDQVNFVAGRIPTST--SEIEGLVCEDISGGLE 341
>At2g41720.2 68415.m05156 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 683
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -2
Query: 139 GLLPEILRFCCLIKYSHRNQQQNKLRHVF 53
G++P+++ + CL+ R++Q K + VF
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
>At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -2
Query: 139 GLLPEILRFCCLIKYSHRNQQQNKLRHVF 53
G++P+++ + CL+ R++Q K + VF
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 28.3 bits (60), Expect = 4.8
Identities = 34/127 (26%), Positives = 48/127 (37%)
Frame = +2
Query: 251 SPRLIEGPRLIESPRVIESPRIYEASRIINQPVITETPCNSVAPRVPSATIITDCTPTVC 430
S R P LI P SP R QP T + +P + S TP+
Sbjct: 29 SSRTSLSPPLIRYPA--GSPDFSPGPRCTTQPSPTFSDFTQASPSLTSFNNPASFTPSF- 85
Query: 431 KNLANTIQLMIICNLLQNTKGGPELALQLASPVLNEVFTSPVFSCGCPNPFSPNVVSPKA 610
+ +N Q++ + N+K A +S TSP SC P+ FSP+ S
Sbjct: 86 -SFSNIHQMIPTPSSSHNSKASVSSA---SSSSFYFPQTSPS-SCSTPSSFSPDSFSHSN 140
Query: 611 VSPSMVP 631
P +P
Sbjct: 141 TGPWSIP 147
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 111 QNRNISGSNPTA*LQDKCRNTSKGPEF 191
+ +N + +NPT+ Q K +NTS+GPEF
Sbjct: 351 EKKNNTVANPTS-QQPKRQNTSEGPEF 376
>At2g35610.1 68415.m04365 expressed protein
Length = 644
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 110 AKSQYLRQQPYSITPRQMPEYIEGPRVYDGPRIFEGPRFYDSPRLIESP 256
A Q LR +PY++ EG R R+ EG FYD P +SP
Sbjct: 355 AMYQQLRLEPYAVHTTFQYAGTEGKR----HRLREGMVFYDPPEYYDSP 399
>At1g08370.1 68414.m00926 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; contains some similarity to
transcription factor [Danio rerio]
gi|15617376|emb|CAC69871
Length = 367
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 218 PRFYDSPRLIESPRLIEGPRLIESPRVIESPRIYEASRI---INQPVITETPCNSVAPRV 388
P F+ PR++ P LI G + +P + + ++ + QP TP S+AP
Sbjct: 271 PSFFGPPRMMAQPHLIPGVSMPTAPPLNPNNASHQQRSYGTPVLQPFPPPTPPPSLAP-A 329
Query: 389 PSATIIT 409
P+ +I+
Sbjct: 330 PTGPVIS 336
>At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family members At5g09530,
At5g09520, At1g44222 [Arabidopsis thaliana]
Length = 144
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 68 FVLLLISMTIFDKTAKSQYLRQQPYSITPRQMPEYIEG--PRVYDGPRIF--EGPRFYDS 235
F++ + S +F + + + +++PEY E P V + P + E P +
Sbjct: 15 FLVFISSSLLFPTPSFAARVSHSLVQEEVKKVPEYTEPEEPEVPEEPELPSPEEPEIPEE 74
Query: 236 PRLIESPRLIEGPRLIESPRVIESP 310
P + E P + P + E P E P
Sbjct: 75 PEIPEEPEVPGEPEVPEEPEEPEEP 99
>At4g34540.1 68417.m04908 isoflavone reductase family protein
similar to phenylcoumaran benzylic ether reductase
homolog Fi1 [Forsythia x intermedia][GI:7578895];
contains isoflavone reductase domain PF02716
Length = 306
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 292 RALDEPRALNEPRTLDEPGTIVESRALEDPW 200
+ +D+PR LN+ L PG I L + W
Sbjct: 198 KTIDDPRTLNKTLYLSPPGNICSMNDLVELW 228
>At4g21650.1 68417.m03137 subtilase family protein contains Pfam
domain, PF00082: Subtilase family; contains Pfam domain,
PF02225: protease associated (PA) domain
Length = 766
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 485 TKGGPELALQLASPVLNEVFTSPV--FSCGCPNPFSPNVVSPKAVSPSM 625
T P + + A+ + + T+ V FSC PN SP ++ P +P +
Sbjct: 477 TTRSPTVRITAATTLTGQPATTKVAAFSCRGPNSVSPAILKPDIAAPGV 525
>At3g28830.1 68416.m03597 expressed protein
Length = 539
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 129 GSNPTA*LQDKCRNTSKGPEFTTDQGSSRALDSTIVPGSSRVRGSLRALGSSRALE**NP 308
GS T + + + G + GS +A S V G S +GS A GS+ A +
Sbjct: 258 GSAATKSKESSGGSATTGKTSGSPSGSPKASPSGSVSGKSSSKGSASAQGSASAQGSASA 317
Query: 309 LGYTKRQGSSTS 344
G QGS+++
Sbjct: 318 QGSASAQGSASA 329
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.5 bits (58), Expect = 8.4
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = +2
Query: 137 PYSITPRQMPEYIEGPRVYDGPRIFEGPR--FYDSPRLIESPRLIEGPRLIESPRVIESP 310
P P P + P V+ P P Y P + SP P P + SP
Sbjct: 612 PVYSPPPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSPP--PPPVKSPPPPPVYSP 669
Query: 311 RIYEASRIINQPVITETPCNSVAPRVPSATI 403
+ ++ + P T+TP NS PR PS T+
Sbjct: 670 PLLPP-KMSSPP--TQTPVNSPPPRTPSQTV 697
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,393,560
Number of Sequences: 28952
Number of extensions: 284845
Number of successful extensions: 948
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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