Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k04
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019104-1|AAH19104.1| 208|Homo sapiens C8orf55 protein protein. 98 2e-20
BC001311-1|AAH01311.1| 208|Homo sapiens chromosome 8 open readi... 98 2e-20
AF242773-1|AAF65450.1| 208|Homo sapiens mesenchymal stem cell p... 98 2e-20
AK075407-1|BAC11600.1| 208|Homo sapiens protein ( Homo sapiens ... 96 1e-19
AK057953-1|BAB71621.1| 365|Homo sapiens protein ( Homo sapiens ... 30 7.0
BC139755-1|AAI39756.1| 793|Homo sapiens SLCO5A1 protein protein. 30 9.2
AF205075-1|AAG42207.1| 848|Homo sapiens organic anion transport... 30 9.2
>BC019104-1|AAH19104.1| 208|Homo sapiens C8orf55 protein protein.
Length = 208
Score = 98.3 bits (234), Expect = 2e-20
Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Frame = +2
Query: 89 MYCIVVTIVALA---YIFWDVNYFLRVAFTIGIGRLFHKKC-GINDSTTIYGFCTTQDVD 256
M ++V ++AL + DV Y +R+ + RL + + G D+D
Sbjct: 1 MLGLLVALLALGLAVFALLDVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLD 60
Query: 257 IFLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKV 436
+ L HMNNARY+RE DFAR R G+ ++ + H + AS R+RR++ + P++V
Sbjct: 61 LLL-HMNNARYLREADFARVAHLTRCGVLGALRQLRAHTVLAASCARHRRSLRLLEPFEV 119
Query: 437 ETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLL 547
T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL
Sbjct: 120 RTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLL 156
>BC001311-1|AAH01311.1| 208|Homo sapiens chromosome 8 open reading
frame 55 protein.
Length = 208
Score = 98.3 bits (234), Expect = 2e-20
Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Frame = +2
Query: 89 MYCIVVTIVALA---YIFWDVNYFLRVAFTIGIGRLFHKKC-GINDSTTIYGFCTTQDVD 256
M ++V ++AL + DV Y +R+ + RL + + G D+D
Sbjct: 1 MLGLLVALLALGLAVFALLDVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLD 60
Query: 257 IFLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKV 436
+ L HMNNARY+RE DFAR R G+ ++ + H + AS R+RR++ + P++V
Sbjct: 61 LLL-HMNNARYLREADFARVAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEV 119
Query: 437 ETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLL 547
T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL
Sbjct: 120 RTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLL 156
>AF242773-1|AAF65450.1| 208|Homo sapiens mesenchymal stem cell
protein DSCD75 protein.
Length = 208
Score = 98.3 bits (234), Expect = 2e-20
Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Frame = +2
Query: 89 MYCIVVTIVALA---YIFWDVNYFLRVAFTIGIGRLFHKKC-GINDSTTIYGFCTTQDVD 256
M ++V ++AL + DV Y +R+ + RL + + G D+D
Sbjct: 1 MLGLLVALLALGLAVFALLDVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLD 60
Query: 257 IFLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKV 436
+ L HMNNARY+RE DFAR R G+ ++ + H + AS R+RR++ + P++V
Sbjct: 61 LLL-HMNNARYLREADFARVAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEV 119
Query: 437 ETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLL 547
T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL
Sbjct: 120 RTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLL 156
>AK075407-1|BAC11600.1| 208|Homo sapiens protein ( Homo sapiens
cDNA PSEC0098 fis, clone NT2RP2002695, highly similar to
Mesenchymal stem cell protein DSCD75. ).
Length = 208
Score = 95.9 bits (228), Expect = 1e-19
Identities = 42/100 (42%), Positives = 68/100 (68%)
Frame = +2
Query: 248 DVDIFLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSP 427
D+D+ L HMNNARY+RE DFAR R G+ ++ + H + AS R+RR++ + P
Sbjct: 58 DLDLLL-HMNNARYLREADFARVAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEP 116
Query: 428 YKVETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLL 547
++V T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL
Sbjct: 117 FEVRTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLL 156
>AK057953-1|BAB71621.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ25224 fis, clone STM00905. ).
Length = 365
Score = 30.3 bits (65), Expect = 7.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 280 IIHVPQENVNVLSSAKAVNCSRIIDSTFLME*SSNTYCEC 161
+IH P E V+ L A+ C RII + SSN + EC
Sbjct: 193 LIH-PSEGVSALWRARNQGCDRIIFTGLFANRSSNVFTEC 231
>BC139755-1|AAI39756.1| 793|Homo sapiens SLCO5A1 protein protein.
Length = 793
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 286 ICEGIRFCEIPFLRSDWYLYKYKSCGRSRSTRSLEYPLS 402
+ G++F F+ WY KYK G R R E+PLS
Sbjct: 686 LAAGLKFVGFIFIFLAWYSIKYKEDGLQR-RRQREFPLS 723
>AF205075-1|AAG42207.1| 848|Homo sapiens organic anion transporter
polypeptide-related protein 4 protein.
Length = 848
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 286 ICEGIRFCEIPFLRSDWYLYKYKSCGRSRSTRSLEYPLS 402
+ G++F F+ WY KYK G R R E+PLS
Sbjct: 741 LAAGLKFVGFIFIFLAWYSIKYKEDGLQR-RRQREFPLS 778
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,205,832
Number of Sequences: 237096
Number of extensions: 2248797
Number of successful extensions: 3509
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3509
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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