Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k04
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55854-11|AAT81209.1|  570|Caenorhabditis elegans Map kinase pro...    29   2.4  
U55854-10|AAN60533.1|  426|Caenorhabditis elegans Map kinase pro...    29   2.4  
U55854-9|AAA98016.3|  605|Caenorhabditis elegans Map kinase prot...    29   2.4  
AF067937-4|AAF99911.2|  352|Caenorhabditis elegans Hypothetical ...    29   2.4  
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.        29   4.3  
AC025726-18|AAK73910.1|  996|Caenorhabditis elegans Hypothetical...    29   4.3  
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical...    29   4.3  
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ...    28   5.6  
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z72501-1|CAA96582.1|  584|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AC024757-6|AAF59453.2|  305|Caenorhabditis elegans Hypothetical ...    27   9.8  

>U55854-11|AAT81209.1|  570|Caenorhabditis elegans Map kinase
           protein 2, isoform c protein.
          Length = 570

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = +2

Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
           +N    +R  DF     Y       +   V GH  Q  S+  YR    +FS  + +TK+ 
Sbjct: 155 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 214

Query: 452 YWEDKTLFIE 481
            W    +F E
Sbjct: 215 LWSAGCIFAE 224


>U55854-10|AAN60533.1|  426|Caenorhabditis elegans Map kinase
           protein 2, isoform b protein.
          Length = 426

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = +2

Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
           +N    +R  DF     Y       +   V GH  Q  S+  YR    +FS  + +TK+ 
Sbjct: 190 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 249

Query: 452 YWEDKTLFIE 481
            W    +F E
Sbjct: 250 LWSAGCIFAE 259


>U55854-9|AAA98016.3|  605|Caenorhabditis elegans Map kinase protein
           2, isoform a protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = +2

Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
           +N    +R  DF     Y       +   V GH  Q  S+  YR    +FS  + +TK+ 
Sbjct: 190 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 249

Query: 452 YWEDKTLFIE 481
            W    +F E
Sbjct: 250 LWSAGCIFAE 259


>AF067937-4|AAF99911.2|  352|Caenorhabditis elegans Hypothetical
           protein F22F7.6 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 155 RVAFTIGI-GRLFHKKCGINDSTTIYGFCTTQDVDIFLRHMNNARYVRELD 304
           R  +T  +   +F    GI  + TIY   T    + +   +  ARYVRE+D
Sbjct: 286 RAGYTFHVPSHVFDVHEGIKHTNTIYSKATIAHQEAYAMDIAGARYVREMD 336


>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
          Length = 2553

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 197 SYGIIFQYLL*MQPSKNNLHPRICMLGPQSSLLYNTLYSEIK---PFKQLKRWI 45
           +YG+ F  +    P KN L PR+  +  +S +  +    +I    P +Q++RW+
Sbjct: 335 TYGVTFFVVKEKLPGKNKLVPRLLGVNKESVMRVDENSKQILKEWPLEQVRRWV 388


>AC025726-18|AAK73910.1|  996|Caenorhabditis elegans Hypothetical
           protein Y71G12B.11b protein.
          Length = 996

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 197 SYGIIFQYLL*MQPSKNNLHPRICMLGPQSSLLYNTLYSEIK---PFKQLKRWI 45
           +YG+ F  +    P KN L PR+  +  +S +  +    +I    P +Q++RW+
Sbjct: 335 TYGVTFFVVKEKLPGKNKLVPRLLGVNKESVMRVDENSKQILKEWPLEQVRRWV 388


>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
           protein Y71G12B.11a protein.
          Length = 2553

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 197 SYGIIFQYLL*MQPSKNNLHPRICMLGPQSSLLYNTLYSEIK---PFKQLKRWI 45
           +YG+ F  +    P KN L PR+  +  +S +  +    +I    P +Q++RW+
Sbjct: 335 TYGVTFFVVKEKLPGKNKLVPRLLGVNKESVMRVDENSKQILKEWPLEQVRRWV 388


>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
           protein Y38E10A.6b protein.
          Length = 1345

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 555 TQLHYSRVFQELIXKPECP-EEIKHWLQSIEVSSAKLRKKD 674
           TQ    R +QE+  +   P EEI+ W Q   VSS +  +KD
Sbjct: 725 TQFVDDRRYQEISCETGMPAEEIRDWFQKKRVSSVEEYRKD 765


>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
           protein Y38E10A.6a protein.
          Length = 1343

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 555 TQLHYSRVFQELIXKPECP-EEIKHWLQSIEVSSAKLRKKD 674
           TQ    R +QE+  +   P EEI+ W Q   VSS +  +KD
Sbjct: 723 TQFVDDRRYQEISCETGMPAEEIRDWFQKKRVSSVEEYRKD 763


>Z72501-1|CAA96582.1|  584|Caenorhabditis elegans Hypothetical
           protein C04C11.2 protein.
          Length = 584

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 260 FLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASS 391
           F+R+   A  V+E +F + H Y     +T +   +GH + G ++
Sbjct: 120 FIRYFIRASLVQEDEFEKIHEYYVKKAFTLVSPSEGHIVTGEAA 163


>AC024757-6|AAF59453.2|  305|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.3a protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
 Frame = +2

Query: 167 TIGIGRLFHKKCGINDSTTIYG----FCTTQDVDIFLRHMNNARYVRE-LDFARFHFYDR 331
           T G+ R  H +CGIN+   +Y       T   V   LR    A  +   +DF +     +
Sbjct: 126 TRGMSRKLHDECGINEKDILYQGLDYHGTESRVSKELRDSRQASIIESCVDFQK-QIQWK 184

Query: 332 TGIYTNIKAVDG--HALQGASSIRYR 403
            GI   +KA  G  + +    S+R R
Sbjct: 185 IGIMEKVKAKSGRSYPMSDGPSVRTR 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,442,942
Number of Sequences: 27780
Number of extensions: 361584
Number of successful extensions: 951
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)