Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k03
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 31 1.1
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 31 1.1
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 31 1.1
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 30 1.9
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 29 2.5
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain in... 29 4.4
U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain in... 29 4.4
U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain int... 29 4.4
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 7.8
U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical p... 28 7.8
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 53 ADREERGAQRKAEPSRPSPEHNSPQHSA-STTSNEVKTTPESKSVDPSN 196
A ++ G ++A PS+P+ ++P+ +A ++TS+ T PE+ DPS+
Sbjct: 417 AQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAPATAPEASRRDPSD 465
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 62 EERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPESKSVDPSN 196
EE G+ AE SPE P S TT + TTPE + D S+
Sbjct: 152 EENGSD--AEEEEESPEKVEPATSTITTEAQTTTTPEEVTQDVSD 194
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 62 EERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPESKSVDPSN 196
EE G+ AE SPE P S TT + TTPE + D S+
Sbjct: 152 EENGSD--AEEEEESPEKVEPATSTITTEAQTTTTPEEVTQDVSD 194
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 62 EERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPESKSVDPSN 196
EE G+ AE SPE P S TT + TTPE + D S+
Sbjct: 152 EENGSD--AEEEEESPEKVEPATSTITTEAQTTTTPEEVTQDVSD 194
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 29 TSLQQQQQADREERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPESKS 181
TS+ + ER + E P P H+SP S ST+++ +T S+S
Sbjct: 66 TSISTSTVSTTPERLTKPYEETDTPIPTHSSPSTSTSTSTSTSTSTSTSRS 116
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 29.9 bits (64), Expect = 1.9
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -1
Query: 93 GSAFLCAPLSSRSACCCCWRLVTLARCRAA 4
G ++ P+ ++ +C CCW A AA
Sbjct: 152 GGHYIIGPIKTQDSCACCWGFAATAVAEAA 181
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 38 QQQQQADREERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPESKSV 184
QQQQQ + A A + H P S+ SN++ + P S V
Sbjct: 353 QQQQQQQQAAAAAAAAAAAASAGGHHQGPPPPTSSQSNQIPSNPNSVPV 401
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 38 QQQQQADREERGAQRKAEPSRPSPEHNSPQHSASTTSNEVKTTPES 175
QQQQQ + + QR+ ++P P+H P +++ ++++ S
Sbjct: 129 QQQQQQQQPVQQIQRQQPIAQPIPQHTIPPSTSNQFQQQIQSAASS 174
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2
Query: 41 QQQQADREERGAQRKAEPSRPSPEHNSPQHSA 136
++QQ +R+++ Q++A+ + +H+S QH A
Sbjct: 667 ERQQQERQQQDRQQQAQQHHQAQQHHSQQHPA 698
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2
Query: 41 QQQQADREERGAQRKAEPSRPSPEHNSPQHSA 136
++QQ +R+++ Q++A+ + +H+S QH A
Sbjct: 667 ERQQQERQQQDRQQQAQQHHQAQQHHSQQHPA 698
>U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform c protein.
Length = 740
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 38 QQQQQADREER--GAQRKAEPSRPSPEHNSPQHSASTTSNE 154
QQQQQA R + K +P P+ NSP S T S++
Sbjct: 614 QQQQQAQRAQSMINGNVKVKPLAAQPKKNSPAPSVITLSSD 654
>U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform a protein.
Length = 821
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 38 QQQQQADREER--GAQRKAEPSRPSPEHNSPQHSASTTSNE 154
QQQQQA R + K +P P+ NSP S T S++
Sbjct: 695 QQQQQAQRAQSMINGNVKVKPLAAQPKKNSPAPSVITLSSD 735
>U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform b protein.
Length = 846
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 38 QQQQQADREER--GAQRKAEPSRPSPEHNSPQHSASTTSNE 154
QQQQQA R + K +P P+ NSP S T S++
Sbjct: 720 QQQQQAQRAQSMINGNVKVKPLAAQPKKNSPAPSVITLSSD 760
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 38 QQQQQADREERGAQRKAE--PSRPSPEHNSPQHSASTTSNEVKTTPES 175
QQQQQ ++++ Q P +P P +PQ+ + TTP S
Sbjct: 1197 QQQQQLQQQQQMHQMPLHHLPQQPPPPSQNPQNPLPQPPQVMPTTPTS 1244
>U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical
protein ZK1248.15 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 38 QQQQQADREERGAQRKAEPS----RPSPEHNSPQHSASTTSNEVK 160
+++QQ D ++ + RK+ S EH++ HS TSN++K
Sbjct: 309 RKKQQTDSDQLNSSRKSSNSDRRQTTRKEHHANSHSNKYTSNDIK 353
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 62 EERGAQRKAEPSRPSPEHNSPQHSASTTS-NEVKTTPESKSVDP 190
E + P+RP+ E+NS Q + ST S V + VDP
Sbjct: 325 ERPSTTQSRPPTRPTSEYNSMQRTKSTRSIRSVTRSDHGHRVDP 368
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,255,444
Number of Sequences: 27780
Number of extensions: 224529
Number of successful extensions: 1025
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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