Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10k02
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.5  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 590 TSAHLISNDASNEN 631
           +S +LI N+ASNEN
Sbjct: 335 SSTNLIQNEASNEN 348



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +2

Query: 500 KIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASN 625
           KIP      TSS +  +  N   R  C  + ++ ++S +  N
Sbjct: 213 KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLN 254


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 590 TSAHLISNDASNEN 631
           +S +LI N+ASNEN
Sbjct: 124 SSTNLIQNEASNEN 137



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +2

Query: 500 KIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASN 625
           KIP      TSS +  +  N   R  C  + ++ ++S +  N
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLN 43


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 590 TSAHLISNDASNEN 631
           +S +LI N+ASNEN
Sbjct: 124 SSTNLIQNEASNEN 137



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +2

Query: 500 KIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASN 625
           KIP      TSS +  +  N   R  C  + ++ ++S +  N
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLN 43


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = +1

Query: 73  KMIKLFSLKQQKKDEEGSTRGGGSQKKASAAQLRITKDLNELNLPKTCNT 222
           K+  +  +K+++KD+   TR   S    +++Q      L++ N  K C +
Sbjct: 366 KLCGMKIVKKRRKDKREITRKSTSSSTHTSSQQTSDSFLSKRNSEKKCGS 415


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 125 LPEEEDHKKKHQQ 163
           LPE+E+ KKK ++
Sbjct: 540 LPEDEEEKKKREE 552


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 469 DRTLWS*L*EQVSNLP*VYSGT 404
           D +LW  L  Q+SNL   + GT
Sbjct: 515 DYSLWKALIFQISNLQTTFGGT 536


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = +1

Query: 430 WKPVLTVNSIVYGLQYLFLEPNPEDP 507
           W P  T  +     +Y    P P DP
Sbjct: 108 WSPAATAAATATEYKYSAAAPGPSDP 133


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 382 NIDLEGNVCLNILRE 426
           ++DL GNVC  ++R+
Sbjct: 158 DVDLIGNVCSYVVRD 172


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +1

Query: 403  VCLNILREDWKPV 441
            +C N++++ WK V
Sbjct: 2107 ICTNVIKKGWKVV 2119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,704
Number of Sequences: 336
Number of extensions: 3301
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)