Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k02
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 198 5e-52
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 102 4e-23
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 93 3e-20
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 93 3e-20
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 93 3e-20
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 85 7e-18
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 79 8e-16
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 77 2e-15
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 73 3e-14
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 66 3e-12
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 64 2e-11
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 63 4e-11
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 33 0.030
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 29 0.48
SPBC19F8.06c |meu22||amino acid permease, unknown 11|Schizosacch... 27 2.6
SPAC328.08c |||tubulin specific chaperone cofactor C |Schizosacc... 26 4.5
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 25 7.9
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 25 7.9
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 198 bits (484), Expect = 5e-52
Identities = 93/182 (51%), Positives = 124/182 (68%)
Frame = +1
Query: 76 MIKLFSLKQQKKDEEGSTRGGGSQKKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLNF 255
M K++ LK+++ +E + G S AQ+RI KD+ +L +P T +T +PDP L
Sbjct: 1 MRKIWELKKKEAQKEKNASG------ISPAQIRIQKDVTDLEIPSTMSTSWPDPIKLNVL 54
Query: 256 KLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWK 435
L I PDEG+Y+GGKF F ++ NYPH+PPKVKC +YHPNID+EGNVCLNILR+DW
Sbjct: 55 HLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWN 114
Query: 436 PVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYFER 615
PVL +NSI+ GLQ+LFL PN EDPLNKEAA +L + + F V+ AM+GG V F+
Sbjct: 115 PVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRTAMKGGLVNGISFDN 174
Query: 616 CL 621
+
Sbjct: 175 VM 176
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 102 bits (245), Expect = 4e-23
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Frame = +1
Query: 172 RITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHE 342
RI ++L +L P +C+ P DDL +++ I P + Y GG F S +YP +
Sbjct: 5 RINRELADLGKDPPSSCSAG-PVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63
Query: 343 PPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 522
PPKV T +YHPNI+ G++CL+ILR+ W P LT++ ++ + L +PNP+DPL E
Sbjct: 64 PPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 523 ADELQSNRRLFE 558
A +++R +E
Sbjct: 124 AHVYKTDRSRYE 135
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 93.5 bits (222), Expect = 3e-20
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Frame = +1
Query: 172 RITKDLNELNLPKTCN-TEFPDPD-DLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHE 342
R+ +L L + T + FPD D +LL++ I P + +Y G KF S NYP+
Sbjct: 32 RLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYS 91
Query: 343 PPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 522
PP + + ++HPN+D+ GN+CL+IL++ W V V +I+ LQ L EPN PLN +A
Sbjct: 92 PPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQA 151
Query: 523 AD 528
A+
Sbjct: 152 AE 153
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 93.5 bits (222), Expect = 3e-20
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +1
Query: 271 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED-WKPVLT 447
P + Y GGKF FS K +YP +PP ++ T +YHPN D EGNVCL IL++ +KP +
Sbjct: 46 PSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIK 105
Query: 448 VNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQ 561
+ S++ + L EPNP+DPL A++ +++R F++
Sbjct: 106 LRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDK 143
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 93.1 bits (221), Expect = 3e-20
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Frame = +1
Query: 172 RITKDLNELNL-PKTCNTEFPDPDDLLNFKLII-CPDEGFYRGGKFVFSFKVGPNYPHEP 345
RI K++ L P P D+L FK+ + P + Y GGKF + YP P
Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMP 65
Query: 346 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 525
P V+ T +YHPN+D G +CL+ L++DW P L + +++ +Q L PNP+DPL+ + A
Sbjct: 66 PNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVA 125
Query: 526 DELQSN 543
+ N
Sbjct: 126 KIWKEN 131
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 85.4 bits (202), Expect = 7e-18
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Frame = +1
Query: 172 RITKDLNELNLPKTCNTE-FPDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEP 345
RI K+L ++ K + + DD+ + K + EG Y GG FV ++ +YP P
Sbjct: 8 RIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRP 67
Query: 346 PKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 522
PK+ +T +YHPN+ + G +CL+IL++ W PV T+ S + LQ L P P +P + +
Sbjct: 68 PKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQV 127
Query: 523 ADELQSNRRLF 555
A N + F
Sbjct: 128 AQVYLQNYQQF 138
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 78.6 bits (185), Expect = 8e-16
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Frame = +1
Query: 154 ASAAQLRITKDLNEL--NLPKTCNTEFPDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVG 324
+SA++ + K L E+ N P+ + D + ++ +II P++ Y GG F +
Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFP 62
Query: 325 PNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR-------------EDWKPVLTVNSIVY 465
+YP PPK+K T ++HPN+ G VC++IL E W PV + +I+
Sbjct: 63 QDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILI 122
Query: 466 GLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 582
+ + PN E P N +AA E + N + F++ V+R +R
Sbjct: 123 SVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVR 161
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 77.4 bits (182), Expect = 2e-15
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Frame = +1
Query: 154 ASAAQLRITKDLNELNL-PKTCNTEFPDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGP 327
++ A+ R+ +D + P + P D+++ + +II P + + G F
Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDE 61
Query: 328 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 507
YP++PP VK + ++HPN+ G +CL+IL+ W P V +I+ +Q L +PN P
Sbjct: 62 QYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASP 121
Query: 508 LNKEAADELQSNRRLFEQHVQRAMRGGY 591
N EAA + N++ + + V++ + +
Sbjct: 122 ANAEAAQLHRENKKEYVRRVRKTVEDSW 149
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 73.3 bits (172), Expect = 3e-14
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +1
Query: 241 DLLNFKL-IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNI 417
DL+N+K+ I + + GG + + YP PPK + ++HPN+ G VCL+I
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 418 LRED--WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 582
L E+ WKP +T+ I+ G+Q L +PN P EA + ++ +E+ V+ R
Sbjct: 97 LNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQAR 153
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 66.5 bits (155), Expect = 3e-12
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 241 DLLNFKLII-CPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLN 414
D+ ++K +I P E Y GG++V V YP PP V +T + HPNI G VC++
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMD 92
Query: 415 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQS 540
IL+ W P ++ S + L + PLN +AA L++
Sbjct: 93 ILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRT 134
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 63.7 bits (148), Expect = 2e-11
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 271 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVL- 444
P E Y GG + ++ YP + P + ++HPNID L G+VCL+++ + W P+
Sbjct: 39 PSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFD 98
Query: 445 TVNSIVYGLQYLFLEPNPEDPLNKEAA 525
+N L L PN DPLN EAA
Sbjct: 99 MINIFEVFLPQLLRYPNASDPLNGEAA 125
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 62.9 bits (146), Expect = 4e-11
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Frame = +1
Query: 151 KASAAQLRITKDLNEL--NLPKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKV 321
KA A + R+ K+ EL N P + DD + +I PD + GG + + K
Sbjct: 3 KAMALR-RLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKF 61
Query: 322 GPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR-------------EDWKPVLTVNSIV 462
+YP PP +K E +HPN+ +G VC++IL E W PV +V I+
Sbjct: 62 PSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKIL 121
Query: 463 YGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 582
+ + EPN E N +A + +R + + V+R R
Sbjct: 122 LSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLAR 161
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 33.5 bits (73), Expect = 0.030
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 229 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 405
P +++L + II P + Y GG++ + P+YP +PP ++ T +
Sbjct: 29 PATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRL 86
Query: 406 CLNIL---REDWKPVLTVNSIVYGL 471
CL+ + W P V++I+ GL
Sbjct: 87 CLSFSDFHPKSWNPSWMVSTILVGL 111
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 80 LNFFH*NNRKKMKRVLPEEEDHKKKHQQP 166
+ +F NN K ++R+L E ED KH +P
Sbjct: 235 IRYFKHNNMKDLERILQELEDDFVKHNRP 263
>SPBC19F8.06c |meu22||amino acid permease, unknown
11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 505 PLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYF 609
PL E +LQ R+L +H+Q GG VGT F
Sbjct: 49 PLQPEDTQDLQ--RKLKPRHMQMIAIGGCVGTGLF 81
>SPAC328.08c |||tubulin specific chaperone cofactor C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 476 IYSWNQTLKIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASNENLHTCKKC 652
+Y N TL + + + Q +N + ++ S ++ ++ S+ NLH KC
Sbjct: 114 VYFENDTLYLANLKNQNIGDNVIPYPNNKAVKVSAKSLRSCNISISNCSSVNLHNATKC 172
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -1
Query: 266 IINLKFNRSSGSGNSVLHVFGRFNSFKSFVIRNWAADAFFCDP 138
II+L + +S + N+ ++FG F ++ + W+ F P
Sbjct: 214 IISLAASSTSETRNTGSYIFGNFENYSGWTNMGWSFILCFTTP 256
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 515 RKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASNENLHTCKKC 652
RK + S TGD ++ F EAAT A L D+ N+ T KC
Sbjct: 157 RKYMECSSLTGDGVDDVF----EAATRAALTVRDSENDKSST--KC 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,625,605
Number of Sequences: 5004
Number of extensions: 56257
Number of successful extensions: 216
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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