Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k02
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 98 7e-21
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 96 2e-20
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 85 4e-17
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 83 2e-16
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 78 6e-15
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 66 2e-11
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 54 8e-08
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 43 2e-04
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 38 0.008
SB_38153| Best HMM Match : DUF590 (HMM E-Value=2.7e-11) 32 0.39
SB_57505| Best HMM Match : ShTK (HMM E-Value=4.1e-06) 32 0.51
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 31 1.2
SB_9234| Best HMM Match : Topoisom_I_N (HMM E-Value=0) 29 4.8
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_14090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_22519| Best HMM Match : Pterin_4a (HMM E-Value=0.86) 28 8.4
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 97.9 bits (233), Expect = 7e-21
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = +1
Query: 238 DDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNI 417
D++ F+L I P +G YRGG+F FS + +YP+ P + C+T +YHPN+D VC+++
Sbjct: 34 DNMEEFELQITPTDGAYRGGQFKFSVRT-TDYPNVAPSINCKTKIYHPNMDGYDGVCMSL 92
Query: 418 LREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK--EAADELQSNRRLFEQHVQRAMRGGY 591
L +DW+ + +V GL +LF PN EDPL+ E E + FE++V+ ++ G
Sbjct: 93 L-DDWQASNDLEDLVQGLLFLFYNPNLEDPLSSLFEEESEEEYEYGSFEENVRASLEGKT 151
Query: 592 VGTSYFERCL 621
V F+R L
Sbjct: 152 VAGENFQRVL 161
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/131 (39%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Frame = +1
Query: 238 DDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDL-EGNVCLN 414
D++ F+L I P +G YRGG+F FS K +YP+ PP +C +YHPN+DL +G+VCL+
Sbjct: 34 DNMEEFELQITPTDGAYRGGQFKFSVKT-EDYPNTPPVPRCVNNIYHPNMDLDDGSVCLS 92
Query: 415 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK--EAADELQSNRRLFEQHVQRAMRGG 588
+L +DW + +V GL +LF PN EDPL+ + D+ + FE++V+ ++ G
Sbjct: 93 LL-DDWNESNDLEDLVQGLLFLFYNPNLEDPLSPLFDLTDDYEYGS--FEENVRASLEGK 149
Query: 589 YVGTSYFERCL 621
V F R L
Sbjct: 150 TVEGITFPRAL 160
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Frame = +1
Query: 286 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED----WKPVLTVN 453
Y G F ++ YP EPPKV+ T +YHPNID G +CL+ L+ WKP L ++
Sbjct: 10 YHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNIS 69
Query: 454 SIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLF 555
S++ + L EPNP+DPL E ++E + N+ F
Sbjct: 70 SVLSTILILMAEPNPDDPLMAEISNEFKYNKAQF 103
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 232 DPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCL 411
D ++L ++ +I P+ Y G F YP +PPK+ +T +YHPNID +G VCL
Sbjct: 19 DESNILYWQGLIVPEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCL 78
Query: 412 NILR-EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 570
I+ E+WKP ++ L L +P PE PL + A+E +++ F ++ +
Sbjct: 79 PIISPENWKPATKTEQVIQALLALVHDPEPEHPLRADLAEEYSKDKKKFMKNAE 132
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +1
Query: 316 KVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED----WKPVLTVNSIVYGLQYLF 483
K+ + P EPPKV+ T +YHPNID G +CL+ L+ WKP L ++S++ + L
Sbjct: 34 KLEASTPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILM 93
Query: 484 LEPNPEDPLNKEAADELQSNRRLF 555
EPNP+DPL E ++E + N+ F
Sbjct: 94 AEPNPDDPLMAEISNEFKYNKAQF 117
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 100 QQKKDEEGSTRGGGSQKKASAAQLRITKDLNELNL--PKTCNTEFPDPDDLLN-FKLIIC 270
+Q++ + S+R + K S A RI ++L E+ L P C+ P DDL + I+
Sbjct: 77 KQRESRKSSSRF--TAKNQSTAAKRIQRELTEITLDPPPNCSAG-PKGDDLYEWYSTILG 133
Query: 271 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTV 450
P Y GG F +YP +PPK G VCL+IL++ W P LT+
Sbjct: 134 PPGSVYEGGVFFLDIHFPSDYPFKPPK---------------GMVCLDILKDSWSPALTI 178
Query: 451 NSIVYGLQYLFLEPNPEDPLNKEAADELQSNR 546
+ ++ + L + NP DPL A NR
Sbjct: 179 SKVLLSICSLLTDCNPADPLVGSIAALYVQNR 210
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Frame = +1
Query: 232 DPDDLLNFKLIICPDEG-FYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVC 408
D +DL +++++ G +Y G F S YP PP + + ++HPN+ G VC
Sbjct: 358 DDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVC 417
Query: 409 LNILRED-------------WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 525
++IL E W+P+ TV +I+ + + EPN E P N +AA
Sbjct: 418 ISILHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESPANVDAA 469
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 60.9 bits (141), Expect = 1e-09
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +1
Query: 364 TAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 522
T ++HPN+ G +C+N L++DWKP L + ++ ++ L + PNPE LN+EA
Sbjct: 149 TKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEA 201
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 54.4 bits (125), Expect = 8e-08
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Frame = +1
Query: 223 EFPDPDDLLNFKLIICPDEG-FYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEG 399
E PD + + + I G Y GG F +YP+ PP + T ++HPNI G
Sbjct: 1147 EVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESG 1206
Query: 400 NVCLNILR-------------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 525
+VC++IL E W P V +I+ + L EPN P N +A+
Sbjct: 1207 DVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDAS 1261
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +1
Query: 229 PDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCET-----AVYHPNID 390
PD DD+ +I P + Y GG F F + P+YP PP+VK T ++PN+
Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLY 64
Query: 391 LEGNVCLNIL 420
G VCL+I+
Sbjct: 65 RNGKVCLSII 74
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 100 QQKKDEEGSTRGGGSQKKASAAQLRITKDLNELNL--PKTCNTEFPDPDDLLN-FKLIIC 270
+Q++ + S+R + K S A RI ++L E+ L P C+ P DDL + I+
Sbjct: 117 KQRESRKSSSRF--TAKNQSTAAKRIQRELTEITLDPPPNCSAG-PKGDDLYEWYSTILG 173
Query: 271 PDEGFYRGGKFVFSFKVGPNYPHEPPK 351
P Y GG F +YP +PPK
Sbjct: 174 PPGSVYEGGVFFLDIHFPSDYPFKPPK 200
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 430 WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 543
W P L + +++ +Q L PNP+DPL + A++ + N
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKVN 40
>SB_38153| Best HMM Match : DUF590 (HMM E-Value=2.7e-11)
Length = 733
Score = 32.3 bits (70), Expect = 0.39
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +1
Query: 70 RKMIKLFSLKQQKKDEEGSTRGGGSQKKASAAQLRITKDLNELNLPKT-CNTEFPDPDDL 246
R +K + KKDE + + GS K + R+ ++ + CNT P + L
Sbjct: 77 RNCVKTAAADIFKKDEGEAQKYLGSGNKIADYNRRMRPQGVVTSVDSSGCNTASPGMEML 136
Query: 247 LNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 420
L ++ GF + GKFV S K+ + P C+ + P D E V + +L
Sbjct: 137 LRVFALVS-GRGFKKAGKFVLSSKL---WESSTPSKTCDVIITFPK-DTEDYVVMWLL 189
>SB_57505| Best HMM Match : ShTK (HMM E-Value=4.1e-06)
Length = 101
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 215 HVFGRFNSFKSFVIRNWAADAFFCDPPPLVEPSS 114
H G S K F++RN A FC PP++ P +
Sbjct: 21 HFVGYCQSNKKFMMRNCPASCGFCGSPPILSPKN 54
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = +1
Query: 157 SAAQLRITKDLNELNLPKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 333
S A R+ ++ EL P D+L + + P + + GG++ + P Y
Sbjct: 9 SPAVKRLMREAKELRNATELYHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEY 68
Query: 334 PHEPPKVKCETAVYHPNIDLEGNVCLNILR---EDWKPVLTVNSIVYGL 471
P +PP + T + ++ +CL++ E W+P ++ +++ +
Sbjct: 69 PMKPPSIMLLTP--NGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAI 115
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +1
Query: 205 PKTCNTEF----PDPDDLLN-FKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKV 354
PKT +T P D L + I+ P Y GG F +YP +PPKV
Sbjct: 34 PKTLSTAAKSAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_9234| Best HMM Match : Topoisom_I_N (HMM E-Value=0)
Length = 335
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 106 KKDEEGSTRGGGSQKKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLNFKLIICPDEG 282
K + G RG G K + R+ + +N+ K + + PDP +K +IC D G
Sbjct: 200 KIEPPGLFRGRGDHPKQGKLKKRVMPEEVTINIGK--DAKVPDPPAGHKWKKVICDDTG 256
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 304 VFSFKV--GPNYPHEPPKVKCETAVYHPNIDLEG 399
+++ K+ GPNYP +PP VK + + ++ +G
Sbjct: 7 IYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 304 VFSFKV--GPNYPHEPPKVKCETAVYHPNIDLEG 399
+++ K+ GPNYP +PP VK + + ++ +G
Sbjct: 7 IYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_14090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 473 SIYSWNQTLKIPSTRKQLTSSKATGDFSNNTFRELC 580
S+YS Q L PSTRK++ S GD + +LC
Sbjct: 113 SLYSNTQYLP-PSTRKRILGSPIAGDLNRKHKLQLC 147
>SB_22519| Best HMM Match : Pterin_4a (HMM E-Value=0.86)
Length = 1578
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 73 KMIKLFSLKQQKKDEEGSTRGGGSQKKASAAQLRITKDLNE-LNLP 207
+M ++ L K +GS G+QK A A + R KDL E L+LP
Sbjct: 1088 RMQRMAILDPSSKKADGSIDQLGAQKTAYALKKRNAKDLQEALDLP 1133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,103,780
Number of Sequences: 59808
Number of extensions: 399175
Number of successful extensions: 1064
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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