Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10k02
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 239 1e-63
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 109 2e-24
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 106 2e-23
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 105 2e-23
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 105 2e-23
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 105 2e-23
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 105 2e-23
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 105 2e-23
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 105 2e-23
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 105 2e-23
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 105 4e-23
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 104 5e-23
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 104 5e-23
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 99 1e-21
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 95 3e-20
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 92 3e-19
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 91 5e-19
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 91 5e-19
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 91 6e-19
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 91 9e-19
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 89 2e-18
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 89 2e-18
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 89 3e-18
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 88 6e-18
At4g36800.1 68417.m05220 RUB1-conjugating enzyme, putative (RCE1... 87 1e-17
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 87 1e-17
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 84 7e-17
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 83 2e-16
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 82 4e-16
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 81 5e-16
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 81 9e-16
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 81 9e-16
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 76 3e-14
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 76 3e-14
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 75 3e-14
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 75 6e-14
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 74 8e-14
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 74 1e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 71 6e-13
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 69 4e-12
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 52 5e-07
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 49 3e-06
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 48 6e-06
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 48 8e-06
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 47 1e-05
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 46 2e-05
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 40 0.001
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 38 0.006
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 38 0.008
At4g08878.1 68417.m01463 inorganic phosphate transporter, putati... 36 0.034
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 35 0.060
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 29 3.9
At4g10520.1 68417.m01724 subtilase family protein contains simil... 28 5.2
At2g25800.1 68415.m03096 expressed protein 28 5.2
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 28 6.8
At2g35540.1 68415.m04353 DNAJ heat shock N-terminal domain-conta... 27 9.0
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 239 bits (585), Expect = 1e-63
Identities = 110/185 (59%), Positives = 141/185 (76%), Gaps = 3/185 (1%)
Frame = +1
Query: 76 MIKLFSLKQQKKDEEGSTRGGGSQ--KKASAAQLRITKDLNELNLPKTCNTEFPD-PDDL 246
MI LF +K+++++E S G G+ KK SA +LR+ KD++ELNLPK+C FP+ +DL
Sbjct: 1 MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60
Query: 247 LNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE 426
+NF++ I PDEG+Y G FVFSF+V YPHE PKVKC+T VYHPNIDLEGNVCLNILRE
Sbjct: 61 MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120
Query: 427 DWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSY 606
DWKPVL +N+++YGL +LF EPN EDPLN EAA L+ N + FE +V+RAM GG VG +
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180
Query: 607 FERCL 621
F RC+
Sbjct: 181 FPRCM 185
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 109 bits (261), Expect = 2e-24
Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Frame = +1
Query: 163 AQLRITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 333
A RI K+L +L P C+ P +D+ +++ I P E Y GG F+ S P+Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAG-PVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 334 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 513
P +PPKV +T VYHPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 514 KEAADELQSNRRLFE 558
E A +++R +E
Sbjct: 121 PEIAHMYKTDRSKYE 135
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 106 bits (254), Expect = 2e-23
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Frame = +1
Query: 163 AQLRITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 333
A RI K+L +L P +C P +D+ +++ I P E Y GG F+ + P+Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 334 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 513
P +PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 121
Query: 514 KEAADELQSNRRLFE 558
E A +++R +E
Sbjct: 122 PEIAHMYKTDRAKYE 136
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 105 bits (253), Expect = 2e-23
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Frame = +1
Query: 163 AQLRITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 333
A RI K+L +L P +C+ P DD+ ++ I P + + GG F+ + P+Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAG-PTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 334 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 513
P +PPKV T VYHPNI+ G++CL+IL+E W P LTV+ ++ + L +PNP+DPL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 514 KEAADELQSNRRLFEQHVQ 570
E A +++R +E Q
Sbjct: 121 PEIAHIYKTDRVKYESTAQ 139
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 105 bits (253), Expect = 2e-23
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Frame = +1
Query: 163 AQLRITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 333
A RI K+L +L P +C+ P DD+ ++ I P + + GG F+ + P+Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAG-PTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 334 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 513
P +PPKV T VYHPNI+ G++CL+IL+E W P LTV+ ++ + L +PNP+DPL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 514 KEAADELQSNRRLFEQHVQ 570
E A +++R +E Q
Sbjct: 121 PEIAHIYKTDRVKYESTAQ 139
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 105 bits (253), Expect = 2e-23
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +1
Query: 163 AQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 336
A RI K+L +L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 337 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 516
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 517 EAADELQSNRRLFE 558
E A ++++ +E
Sbjct: 122 EIAHMYKTDKNKYE 135
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 105 bits (253), Expect = 2e-23
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +1
Query: 163 AQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 336
A RI K+L +L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 337 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 516
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 517 EAADELQSNRRLFE 558
E A ++++ +E
Sbjct: 122 EIAHMYKTDKNKYE 135
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 105 bits (253), Expect = 2e-23
Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +1
Query: 163 AQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 336
A RI K+L +L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 337 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 516
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 517 EAADELQSNRRLFE 558
E A +++R +E
Sbjct: 122 EIAHMYKTDRAKYE 135
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 105 bits (253), Expect = 2e-23
Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +1
Query: 163 AQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 336
A RI K+L +L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 337 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 516
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 517 EAADELQSNRRLFE 558
E A +++R +E
Sbjct: 122 EIAHMYKTDRAKYE 135
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 105 bits (253), Expect = 2e-23
Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
Frame = +1
Query: 163 AQLRITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 333
A RI K+L EL P +C+ P +D+ +++ I P+E Y GG F+ + P+Y
Sbjct: 2 ATRRILKELKELQRDPPVSCSAG-PTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 334 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 513
P +PPKV T V+HPNI+ GN+CL+IL++ W P LT++ ++ + L +PNP+DPL
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 514 KEAADELQSNRRLFE 558
E A ++++ +E
Sbjct: 121 PEIAHIYKTDKTKYE 135
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 105 bits (251), Expect = 4e-23
Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +1
Query: 163 AQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 336
A RI K+L +L P T + P +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 337 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 516
+PPKV T V+HPN++ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 517 EAADELQSNRRLFE 558
E A +++R +E
Sbjct: 122 EIAHMYKTDRAKYE 135
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 104 bits (250), Expect = 5e-23
Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +1
Query: 163 AQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 336
A RI K+L +L P T + P +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91
Query: 337 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 516
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 92 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151
Query: 517 EAADELQSNRRLFE 558
E A ++++ +E
Sbjct: 152 EIAHMYKTDKNKYE 165
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 104 bits (250), Expect = 5e-23
Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +1
Query: 163 AQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 336
A RI K+L +L P T + P +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 337 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNK 516
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ + L +PNP+DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 517 EAADELQSNRRLFE 558
E A ++++ +E
Sbjct: 122 EIAHMYKTDKNKYE 135
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 99 bits (238), Expect = 1e-21
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Frame = +1
Query: 163 AQLRITKDLNELNL--PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNY 333
A RI+++L ++ P C+ +D+ +++ I P + Y GG F S +Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 334 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLN 513
P +PPKV +T VYHPNID +G++CL+IL+E W P T + ++ + L +PNP DPL
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLV 121
Query: 514 KEAADELQSNRRLFEQHVQR 573
E A + ++ +E Q+
Sbjct: 122 PEIAHLYKVDKSKYESTAQK 141
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/100 (41%), Positives = 60/100 (60%)
Frame = +1
Query: 271 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTV 450
PD Y GG F S K +YP +PPK +T +YHPNI+ EG++C+NIL++ W P L V
Sbjct: 46 PDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMV 105
Query: 451 NSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 570
++ + L +PNP+DPL E ++NR F+Q +
Sbjct: 106 EKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAR 145
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/144 (29%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Frame = +1
Query: 154 ASAAQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGP 327
++ A+ R+ +D L P + P ++++ + +I PD+ + GG F S +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 328 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 507
+YP++PP V+ + ++HPNI +G++CL+IL+ W P+ V +I+ +Q L +PNP P
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 508 LNKEAADELQSNRRLFEQHVQRAM 579
N EAA ++R + + V+ +
Sbjct: 122 ANSEAARMFSESKREYNRRVREVV 145
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 91.5 bits (217), Expect = 5e-19
Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = +1
Query: 154 ASAAQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGP 327
++ A+ R+ +D L P + P ++++ + +I PD+ + GG F S +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 328 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 507
+YP++PP V+ + ++HPNI +G++CL+IL+ W P+ V +I+ +Q L +PNP P
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 508 LNKEAADELQSNRRLFEQHVQ 570
N EAA ++R + + V+
Sbjct: 122 ANSEAARMYSESKREYNRRVR 142
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 91.5 bits (217), Expect = 5e-19
Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = +1
Query: 154 ASAAQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGP 327
++ A+ R+ +D L P + P ++++ + +I PD+ + GG F S +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 328 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 507
+YP++PP V+ + ++HPNI +G++CL+IL+ W P+ V +I+ +Q L +PNP P
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 508 LNKEAADELQSNRRLFEQHVQ 570
N EAA ++R + + V+
Sbjct: 122 ANSEAARMYSESKREYNRRVR 142
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Frame = +1
Query: 172 RITKDLNEL-NLPKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEP 345
RI K+ L + P + P D++ F ++I P + Y GG F + YP
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 346 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 525
PKV+ T +YHPNID G +CL+IL++ W P L + +++ +Q L PNP+DPL++ A
Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA 128
Query: 526 DELQSN 543
+SN
Sbjct: 129 KHWKSN 134
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 90.6 bits (215), Expect = 9e-19
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 226 FPDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 402
FP+ D++ +K I + + G ++ S +YP +PPKVK ET +HPN+D+ GN
Sbjct: 58 FPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGN 117
Query: 403 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 573
+CL+IL++ W V +I+ +Q L EPN PLN +AA +L SN+ + + V++
Sbjct: 118 ICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAA-QLWSNQEEYRKMVEK 173
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/123 (31%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +1
Query: 229 PDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 405
P ++++++ LI P++ + GG F + +YP++PP V+ + ++HPNI +G++
Sbjct: 28 PQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSI 87
Query: 406 CLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRG 585
CL+IL+ W P+ V +++ +Q L +PNP+ P N EAA N+R + + V +
Sbjct: 88 CLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQ 147
Query: 586 GYV 594
YV
Sbjct: 148 SYV 150
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Frame = +1
Query: 172 RITKDLNEL-NLPKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEP 345
RI K+ L + P + P +++ F ++I P + Y GG F + YP
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 346 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 525
PKV+ T +YHPNID G +CL+IL++ W P L + +++ +Q L PNP+DPL++ A
Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA 128
Query: 526 DELQSN 543
+SN
Sbjct: 129 KHWKSN 134
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 88.6 bits (210), Expect = 3e-18
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = +1
Query: 226 FPDPDDLLNFK-LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 402
FP+ D++ +K I + + G ++ S +YP + PKVK ET +HPN+DL GN
Sbjct: 59 FPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGN 118
Query: 403 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 573
+CL+IL++ W V +I+ +Q L EPN PLN +AA +L SN+ + + V++
Sbjct: 119 ICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAA-QLWSNQEEYRKMVEK 174
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 87.8 bits (208), Expect = 6e-18
Identities = 37/95 (38%), Positives = 56/95 (58%)
Frame = +1
Query: 259 LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 438
+I+ P + Y GG F + YP PKV+ T +YHPNID G +CL+IL++ W P
Sbjct: 7 MILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSP 66
Query: 439 VLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 543
L + +++ +Q L PNP+DPL++ A +SN
Sbjct: 67 ALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 101
>At4g36800.1 68417.m05220 RUB1-conjugating enzyme, putative (RCE1)
this gene is frameshifted and may be a pseudogene;
identical over first 79 amino acids to RUB1 conjugating
enzyme [Arabidopsis thaliana] GI:6635457
Length = 113
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/79 (49%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = +1
Query: 76 MIKLFSLKQQKKDE-EGSTRGGGSQKKASAAQLRITKDLNELNLPKTCNTEFPD-PDDLL 249
MI LF +K++++++ + +TRGG S KK SA +LR+ KD++ELNLP +C+ FP+ DDL+
Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60
Query: 250 NFKLIICPDEGFYRGGKFV 306
NF++ I PD+G+Y G FV
Sbjct: 61 NFEVSIKPDDGYYHNGTFV 79
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 86.6 bits (205), Expect = 1e-17
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = +1
Query: 121 GSTRGGGSQKKASAAQLRITKDLNELNL--PKTCNTEFPDPDDLLNF-KLIICPDEGFYR 291
G+ ++ SA+ RI +++ ELN+ P C+ P D+L ++ II P Y
Sbjct: 23 GTASSWVAKTSVSASGKRIQREMAELNIDPPPDCSAG-PKGDNLYHWIATIIGPSGTPYE 81
Query: 292 GGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 471
GG F +YP +PPK+ +T +YH N+D G++ +NILR+ W P LT+ ++ +
Sbjct: 82 GGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAI 141
Query: 472 QYLFLEPNPEDP 507
+ +FL+P P P
Sbjct: 142 RSIFLKPEPYSP 153
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 84.2 bits (199), Expect = 7e-17
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Frame = +1
Query: 163 AQLRITKDLNELNL-PKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYP 336
A RI K+L +L P T + P +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 337 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 459
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +1
Query: 271 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVL- 444
P + Y+GG + ++ YP++ P V T +YHPN+D L G+VCL+++ + W P+
Sbjct: 39 PKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFD 98
Query: 445 TVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 570
VN L L L PNP DPLN EAA + +R +EQ V+
Sbjct: 99 LVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 81.8 bits (193), Expect = 4e-16
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Frame = +1
Query: 160 AAQLRITKDLNELNLPKTCNTEFP-DPDDLLNFK---LIICPDEGFYRGGKFVFSFKVGP 327
A++ R+ K+ E+ K + + DD FK LI P E Y GG F +F V
Sbjct: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
Query: 328 NYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPED 504
YP +PP+V+ T ++HPN+ + G +CL+IL+ W P T+ S+ + L P P+
Sbjct: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
Query: 505 PLNKEAADELQS 540
PLN ++ + L+S
Sbjct: 123 PLNCDSGNLLRS 134
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 81.4 bits (192), Expect = 5e-16
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +1
Query: 271 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVL- 444
P + Y GG + ++ YP++ P V T +YHPN+D + G+VCL+++ + W P+
Sbjct: 39 PKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFD 98
Query: 445 TVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 570
VN L L L PNP DPLN EAA + +R +EQ V+
Sbjct: 99 LVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVK 140
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 80.6 bits (190), Expect = 9e-16
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +1
Query: 286 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLTVNSIV 462
Y GG F + YP EPPK++ T V+HPNI + G +CL+IL++ W P LT+ + +
Sbjct: 47 YEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTAL 106
Query: 463 YGLQYLFLEPNPEDPLNKEAADELQSNRRLF 555
+Q L P P+DP + A++ N ++F
Sbjct: 107 VSIQALLSAPEPKDPQDAVVAEQYMKNYQVF 137
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 80.6 bits (190), Expect = 9e-16
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +1
Query: 271 PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL----REDWKP 438
P++ Y G F ++ YP +PP V T +YHPNID G +CL+IL + W+P
Sbjct: 54 PEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQP 113
Query: 439 VLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 558
L +++++ ++ L EPNP+D L E + E + NR+ F+
Sbjct: 114 SLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFD 153
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/95 (32%), Positives = 52/95 (54%)
Frame = +1
Query: 286 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVY 465
Y G F + ++PH PPK T ++HPN+ G +C+N L++DW P L + ++
Sbjct: 54 YENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLS 113
Query: 466 GLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 570
++ L +EP PE LN++A L N + +H +
Sbjct: 114 VVRCLLIEPFPESALNEQAGKMLLENYDEYARHAR 148
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 75.8 bits (178), Expect = 3e-14
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Frame = +1
Query: 262 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 423
II P + Y GG F NYP+ PP V+ + ++HPN+ +G VC++IL
Sbjct: 41 IIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDP 100
Query: 424 -------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 582
E W PV TV SI+ + + PN E P N EAA E + R F++ V R +R
Sbjct: 101 SGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVR 160
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Frame = +1
Query: 238 DDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCL 411
DDL F + P + Y+GG + ++ YP++ P V +YHPN+D G VCL
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCL 86
Query: 412 NILREDWKPVL-TVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQ 570
+++ + W P+ +N L L L PNP DP N EAA L +R +E V+
Sbjct: 87 DVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVK 140
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 74.5 bits (175), Expect = 6e-14
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Frame = +1
Query: 262 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 423
I+ P + Y GG F NYP PP V + ++HPN+ +G VC++IL
Sbjct: 42 IMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDP 101
Query: 424 -------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 582
E W PV TV SIV + + PN E P N EAA E + NR F + V R +R
Sbjct: 102 HGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVR 161
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 74.1 bits (174), Expect = 8e-14
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Frame = +1
Query: 262 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 423
II P + Y GG F NYP+ PP V+ + ++HPN+ +G VC++IL
Sbjct: 73 IIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDP 132
Query: 424 -------EDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 582
E W PV TV SI+ + + PN E P N EAA E + R F++ V R +R
Sbjct: 133 SGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVR 192
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +1
Query: 286 YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED--WKPVLTVNSI 459
+ GG F + +YP +PPK K +HPN+ G VCL+IL ED W+P +TV I
Sbjct: 54 WEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQI 113
Query: 460 VYGLQYLFLEPNPEDP 507
+ G+Q L PNP DP
Sbjct: 114 LVGIQDLLDTPNPADP 129
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 71.3 bits (167), Expect = 6e-13
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Frame = +1
Query: 154 ASAAQLRITKDLNELN--LPKTCNTEFPDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVG 324
+ +A+ R+ K+ E + L + P P+++ ++ + G Y G F S +
Sbjct: 27 SKSAENRLWKEFQEKDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIP 86
Query: 325 PNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPED 504
P YP+EPPK+ +T ++HPNI G + ++IL W LT+N ++ L + NP +
Sbjct: 87 PKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTINLVL--LSICSILSNPVE 144
Query: 505 PL--NKEAADELQSNRRLFEQ 561
PL + AA Q +R+ +E+
Sbjct: 145 PLLVSNHAARLYQKDRKAYEK 165
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +1
Query: 172 RITKDLNEL-NLPKTCNTEFPDPDDLLNFKLIIC-PDEGFYRGGKFVFSFKVGPNYPHEP 345
RI K+ L + P + P D++ F ++I P + Y GG F + YP
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 346 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYL 480
PKV+ T +YHPNID G +CL+IL++ W P L + +++ L+Y+
Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVL--LRYM 111
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +1
Query: 172 RITKDLNELNLPKTCNTEFPDPDDLLNFKLIICPDEG-FYRGGKFVFSFKVGPNYPHEPP 348
R+ K+L+E L D+L + + + G Y + + +YP E P
Sbjct: 19 RLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAP 78
Query: 349 KVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYG-LQYLFLEPNPEDPLNKE 519
+V A HP+I G++CL+IL + W P +TVNS+ L L P + P + +
Sbjct: 79 QVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRPADND 137
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +1
Query: 124 STRGGGSQKKASA-AQLRITKDLNELNLPKTCNTEFPDPDDLLNFKLIICPDEG-FYRGG 297
S+ G S+K S A R+ K+L E + + D+L + + + G Y
Sbjct: 2 SSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAND 61
Query: 298 KFVFSFKVGPNYPHEPPKVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 459
+ +YP E P+V A HP+I G++CL+IL + W P +TV+SI
Sbjct: 62 TYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSI 116
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Frame = +1
Query: 172 RITKDLNELNLPKTCNTEFPDPDDLLNFKLIICPDEG-FYRGGKFVFSFKVGPNYPHEPP 348
R+ K+L+E + + D+L + + + G Y + + +YP E P
Sbjct: 19 RLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAP 78
Query: 349 KVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYG-LQYLFLEPNPEDPLNKE 519
+V A HP+I G++CL+IL + W P +TV+S+ L L P + P + +
Sbjct: 79 QVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEKQRPTDND 137
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +1
Query: 229 PDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 405
P P+D+L + ++ EG + GG + K P YP++PP + T + + +
Sbjct: 29 PSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKI 86
Query: 406 CLNIL---REDWKPVLTVNSIVYGLQYLFLEPNP 498
CL++ E W P+ +V+SI+ GL ++ +P
Sbjct: 87 CLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +1
Query: 229 PDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 405
P P+D+L + ++ EG + GG + K P YP++PP + T + + +
Sbjct: 29 PSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKI 86
Query: 406 CLNIL---REDWKPVLTVNSIVYGLQYLFLEPNP 498
CL++ E W P+ +V+SI+ GL ++ +P
Sbjct: 87 CLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 193 ELNLPKTCNTEFPDPD-DLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETA 369
E NLP T + DLL L+ P Y G F F + P YPHEPP V +
Sbjct: 675 EANLPNTIYVRVCEERMDLLRAALVGAPGTP-YHDGLFFFDIMLPPQYPHEPPMVHYHSG 733
Query: 370 --VYHPNIDLEGNVCLNIL 420
+PN+ G VCL++L
Sbjct: 734 GMRLNPNLYESGRVCLSLL 752
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 328 NYPHEPPKVKCE-TAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 459
+YP E P+V + A HP+I G++CL++L + W P + ++SI
Sbjct: 72 HYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSI 116
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 37.9 bits (84), Expect = 0.006
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Frame = +1
Query: 175 ITKDLNELNLPKTCNTEFPDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVGPNYPHEPPK 351
+ K+L E + C + DLL + +I EG Y G F F + YP PPK
Sbjct: 617 LDKNLPETIFVRACESRI----DLL--RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPK 670
Query: 352 VKCETA--VYHPNIDLEGNVCLNIL-------REDWKP-VLTVNSIVYGLQYLFLEPNP 498
V + +PN+ G VCL+++ RE W P T+ ++ +Q L L P
Sbjct: 671 VHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEKP 729
Score = 37.5 bits (83), Expect = 0.008
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 11/128 (8%)
Frame = +1
Query: 148 KKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLNFKLIICPDEGF-YRGGKFVFSFKVG 324
KK A + DL E + C + DLL + +I EG Y G F F +
Sbjct: 274 KKVQADWKILENDLPEAISVRACESRM----DLL--RAVIIGAEGTPYHDGLFFFDIQFP 327
Query: 325 PNYPHEPPKVKCETA--VYHPNIDLEGNVCLNIL-------REDWKP-VLTVNSIVYGLQ 474
YP PP V + +PN+ G VCL++L RE W P T+ ++ +Q
Sbjct: 328 DTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQ 387
Query: 475 YLFLEPNP 498
L L P
Sbjct: 388 ALILNEKP 395
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Frame = +1
Query: 286 YRGGKFVFSFKVGPNYPHEPPKVKCETAVY--HPNIDLEGNVCLNIL-------REDWKP 438
Y+ G F F F + +YP PP + + +PN+ EG VCL++L E W P
Sbjct: 894 YQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDP 953
Query: 439 -VLTVNSIVYGLQYLFLEPNP 498
++ ++ LQ L L P
Sbjct: 954 KSSSILQVLVSLQGLVLNSKP 974
>At4g08878.1 68417.m01463 inorganic phosphate transporter, putative
similar to inorganic phosphate transporter (GI:3869190)
[Arabidopsis thaliana]
Length = 280
Score = 35.5 bits (78), Expect = 0.034
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +1
Query: 217 NTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYP 336
N E D F L IC E ++ +FVFSF GPNYP
Sbjct: 240 NKEIFTEVDEKRFALTICQSENWF--SRFVFSFNFGPNYP 277
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 34.7 bits (76), Expect = 0.060
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 13/152 (8%)
Frame = +1
Query: 82 KLFSLKQQKKDEEGSTRGGGSQKKASAAQLRITKD--LNELNLPKTCNTE-FPDPDDLLN 252
K F + + D +++G S++ + RI + + E +LP+ + DLL
Sbjct: 306 KRFDIVEDFSDHHYASKGTTSKQHSKDWAKRIQDEWRILEKDLPEMIFVRAYESRMDLLR 365
Query: 253 FKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETA--VYHPNIDLEGNVCLNIL-- 420
+II Y G F F YP PP V + +PN+ G VCL++L
Sbjct: 366 -AVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGT 424
Query: 421 -----REDWKP-VLTVNSIVYGLQYLFLEPNP 498
RE W P T+ ++ +Q L L P
Sbjct: 425 WSGNQREKWIPNTSTMLQVLVSIQGLILNQKP 456
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +1
Query: 262 IICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV---CLNILREDW 432
I+ P Y G F G YP PP V+ +T + ++ E V L + +W
Sbjct: 51 ILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNW 110
Query: 433 KPVLTVNSIVYGLQ 474
+ T+ I+ L+
Sbjct: 111 RREYTMEDILVKLK 124
>At4g10520.1 68417.m01724 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 756
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 319 VGPNYPHEPPKVKCETAVYHPNIDLEGNVCL 411
VG YP P CE +PN +EG V L
Sbjct: 374 VGLTYPESPLSGDCEKLSANPNSTMEGKVVL 404
>At2g25800.1 68415.m03096 expressed protein
Length = 996
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +2
Query: 461 CTVSSIYSWNQTLKIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISND 616
CT S + W + K P+T+K+ + ++ ++C S H I ++
Sbjct: 703 CTTGSKFQWKKKEKTPTTQKRESQVSVMNGENSFGVTQICVRINSLHKIRSE 754
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 232 DPDDLLNFK---LIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 402
D DD+L I+ P Y G F G +YP PP V+ ++ + ++ E
Sbjct: 38 DADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENG 97
Query: 403 V 405
V
Sbjct: 98 V 98
>At2g35540.1 68415.m04353 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226:
DnaJ domain
Length = 575
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 488 NQTLKIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASNENL--HTCK 646
N+ ++ S + ++ S + GD +TF +C S H +NL TCK
Sbjct: 116 NEAFRVFSDKGEMVSGGSGGD-ETSTFSAVCSGCRSVHKFDRKYLGQNLMCPTCK 169
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,515,438
Number of Sequences: 28952
Number of extensions: 291335
Number of successful extensions: 920
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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