Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j22
         (619 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S63912-1|AAB27595.1|  269|Homo sapiens FBRNP protein.                  31   3.3  
AB018268-1|BAA34445.1|  573|Homo sapiens KIAA0725 protein protein.     31   3.3  
AJ405700-1|CAC03813.1|   64|Homo sapiens T-cell receptor beta ch...    31   4.3  
X79536-1|CAA56072.1|  320|Homo sapiens hnRNPcore protein A1 prot...    29   9.9  
X12671-1|CAA31191.1|  320|Homo sapiens hnrnp a1 protein protein.       29   9.9  
D87930-1|BAA22378.1| 1030|Homo sapiens myosin phosphatase target...    29   9.9  
BC121133-1|AAI21134.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC113470-1|AAI13471.1|  378|Homo sapiens LOC653115 protein protein.    29   9.9  
BC112027-1|AAI12028.1|  378|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC111752-1|AAI11753.1| 1030|Homo sapiens PPP1R12A protein protein.     29   9.9  
BC108266-1|AAI08267.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC103707-1|AAI03708.1|  267|Homo sapiens HNRPA1 protein protein.       29   9.9  
BC074502-1|AAH74502.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC073162-1|AAH73162.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC070315-1|AAH70315.1|  320|Homo sapiens HNRPA1 protein protein.       29   9.9  
BC052296-1|AAH52296.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC033714-1|AAH33714.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC012158-1|AAH12158.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC009600-1|AAH09600.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
BC004945-1|AAH04945.1|  298|Homo sapiens Unknown (protein for IM...    29   9.9  
BC002355-1|AAH02355.1|  320|Homo sapiens heterogeneous nuclear r...    29   9.9  
AY363225-1|AAQ63629.1|  378|Homo sapiens heterogeneous nuclear r...    29   9.9  
AL137058-3|CAI16736.1|  320|Homo sapiens protein ( Human DNA seq...    29   9.9  
AF458589-1|AAM49717.1|  995|Homo sapiens myosin phosphatase targ...    29   9.9  
AC079305-1|AAY14709.1|  378|Homo sapiens unknown protein.              29   9.9  

>S63912-1|AAB27595.1|  269|Homo sapiens FBRNP protein.
          Length = 269

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 100 ESFFTPNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMND-IAALREDLVKL 276
           E    P A + +K   V  I+ED  E+N  D +E  YG +     M D  +  +     +
Sbjct: 114 EDSVKPGAHLTVKKIFVGSIKEDTEEYNLRDYFEK-YGKIETIEVMEDRQSGKKRGFASV 172

Query: 277 EFSDHDDV 300
            F DHD V
Sbjct: 173 TFDDHDTV 180


>AB018268-1|BAA34445.1|  573|Homo sapiens KIAA0725 protein protein.
          Length = 573

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +1

Query: 175 EHNNLDSYENDYGSMRKSLSMNDIAALREDLVKLEFSDHDDVYQR 309
           + ++L   +++ GS+   +   D   L EDL KL+ S+  D++++
Sbjct: 226 QKDSLGDIDSEKGSLNIVMDQGDTPTLEEDLKKLQLSEFFDIFEK 270


>AJ405700-1|CAC03813.1|   64|Homo sapiens T-cell receptor beta chain
           protein.
          Length = 64

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 37  FYFVYF-ETQKMAKNYVTNFRGESFFTPNAKMNI 135
           F F YF ETQ+   N+   F G  FF   ++MN+
Sbjct: 4   FLFEYFSETQRNKGNFPGRFSGRQFFNSRSEMNV 37


>X79536-1|CAA56072.1|  320|Homo sapiens hnRNPcore protein A1
           protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>X12671-1|CAA31191.1|  320|Homo sapiens hnrnp a1 protein protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>D87930-1|BAA22378.1| 1030|Homo sapiens myosin phosphatase target
           subunit 1 protein.
          Length = 1030

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +1

Query: 175 EHNNLDSYENDYGSMRKSLSMNDIAALREDLVKLEFS-DHDDVYQRYRRPTAGPQELSKT 351
           E+   +  E +     K     +    RED  K ++S  +D+ YQRYR  +        +
Sbjct: 723 ENEEKEKEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSS 782

Query: 352 KFVSMAEAIY 381
              +M+ ++Y
Sbjct: 783 SLSTMSSSLY 792


>BC121133-1|AAI21134.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC113470-1|AAI13471.1|  378|Homo sapiens LOC653115 protein protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 100 ESFFTPNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMND-IAALREDLVKL 276
           E    P A + +K   V  I+ED  E+N  D +E  YG +     M D  +  +     +
Sbjct: 114 EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVMEDRQSGKKRGFAFV 172

Query: 277 EFSDHDDV 300
            F DHD V
Sbjct: 173 TFDDHDTV 180


>BC112027-1|AAI12028.1|  378|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A3 protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 100 ESFFTPNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMND-IAALREDLVKL 276
           E    P A + +K   V  I+ED  E+N  D +E  YG +     M D  +  +     +
Sbjct: 114 EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVMEDRQSGKKRGFAFV 172

Query: 277 EFSDHDDV 300
            F DHD V
Sbjct: 173 TFDDHDTV 180


>BC111752-1|AAI11753.1| 1030|Homo sapiens PPP1R12A protein protein.
          Length = 1030

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +1

Query: 175 EHNNLDSYENDYGSMRKSLSMNDIAALREDLVKLEFS-DHDDVYQRYRRPTAGPQELSKT 351
           E+   +  E +     K     +    RED  K ++S  +D+ YQRYR  +        +
Sbjct: 723 ENEEKEKEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSS 782

Query: 352 KFVSMAEAIY 381
              +M+ ++Y
Sbjct: 783 SLSTMSSSLY 792


>BC108266-1|AAI08267.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1-like protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC103707-1|AAI03708.1|  267|Homo sapiens HNRPA1 protein protein.
          Length = 267

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC074502-1|AAH74502.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC073162-1|AAH73162.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC070315-1|AAH70315.1|  320|Homo sapiens HNRPA1 protein protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC052296-1|AAH52296.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC033714-1|AAH33714.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC012158-1|AAH12158.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC009600-1|AAH09600.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>BC004945-1|AAH04945.1|  298|Homo sapiens Unknown (protein for
           IMAGE:3615335) protein.
          Length = 298

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 76  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 134

Query: 292 DDV 300
           D V
Sbjct: 135 DSV 137


>BC002355-1|AAH02355.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>AY363225-1|AAQ63629.1|  378|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A3 protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 100 ESFFTPNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMND-IAALREDLVKL 276
           E    P A + +K   V  I+ED  E+N  D +E  YG +     M D  +  +     +
Sbjct: 114 EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVMEDRQSGKKRGFAFV 172

Query: 277 EFSDHDDV 300
            F DHD V
Sbjct: 173 TFDDHDTV 180


>AL137058-3|CAI16736.1|  320|Homo sapiens protein ( Human DNA
           sequence from clone RP11-78J21 on chromosome
           13q32.2-33.3 Contains 2 novel genes, a pseudogene
           similar to part of TPTE and  ).
          Length = 320

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 PNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMNDI-AALREDLVKLEFSDH 291
           P A + +K   V  I+ED  EH+  D +E  YG +     M D  +  +     + F DH
Sbjct: 98  PGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156

Query: 292 DDV 300
           D V
Sbjct: 157 DSV 159


>AF458589-1|AAM49717.1|  995|Homo sapiens myosin phosphatase target
           subunit 1 variant protein.
          Length = 995

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +1

Query: 175 EHNNLDSYENDYGSMRKSLSMNDIAALREDLVKLEFS-DHDDVYQRYRRPTAGPQELSKT 351
           E+   +  E +     K     +    RED  K ++S  +D+ YQRYR  +        +
Sbjct: 723 ENEEKEKEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSS 782

Query: 352 KFVSMAEAIY 381
              +M+ ++Y
Sbjct: 783 SLSTMSSSLY 792


>AC079305-1|AAY14709.1|  378|Homo sapiens unknown protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 100 ESFFTPNAKMNIKDEPVTPIEEDFGEHNNLDSYENDYGSMRKSLSMND-IAALREDLVKL 276
           E    P A + +K   V  I+ED  E+N  D +E  YG +     M D  +  +     +
Sbjct: 114 EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVMEDRQSGKKRGFAFV 172

Query: 277 EFSDHDDV 300
            F DHD V
Sbjct: 173 TFDDHDTV 180


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,321,074
Number of Sequences: 237096
Number of extensions: 1691157
Number of successful extensions: 7438
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7438
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)