Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j22
(619 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 27 0.11
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 1.8
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 23 1.8
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 3.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 3.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 4.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.3
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 9.6
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 9.6
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 9.6
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 27.5 bits (58), Expect = 0.11
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 376 IYHYQRDTPGRFRSTKPQIFRTQGRAGPNGLTVPQSPMLR 495
IY + D FR T F G GPNGLT Q ++R
Sbjct: 63 IYSNRTDFTTTFRPTAGMTFN--GGVGPNGLTKKQEMLVR 100
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +1
Query: 157 IEEDFGEHNNLDSYENDYGSMRKSLSMNDIAALRE 261
+ ++ +NN ++Y N+Y + K L +I + +
Sbjct: 88 LSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQ 122
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +3
Query: 33 YFLFCVFRNTENGQKLRD*FSW 98
+FL+ VF NG++++ +SW
Sbjct: 3 HFLWIVFLALANGEEIKTIYSW 24
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 412 EIYPEYLFDNGI 377
EIYP Y FD+ +
Sbjct: 164 EIYPNYFFDSSV 175
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 412 EIYPEYLFDNGI 377
EIYP Y FD+ +
Sbjct: 164 EIYPNYFFDSSV 175
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 178 HNNLDSYENDYGSMRKSLSMN 240
+NN ++Y N+Y + K L N
Sbjct: 334 YNNYNNYNNNYNNNYKKLYYN 354
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 196 YENDYGSMRKSLSMNDIAA 252
++ND G++RKS S+ + A
Sbjct: 218 WKNDEGTLRKSPSLTSLNA 236
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 196 YENDYGSMRKSLSMNDIAA 252
++ND G++RKS S+ + A
Sbjct: 218 WKNDEGTLRKSPSLTSLNA 236
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 196 YENDYGSMRKSLSMNDIAA 252
++ND G++RKS S+ + A
Sbjct: 269 WKNDEGTLRKSPSLTSLNA 287
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 196 YENDYGSMRKSLSMNDIAA 252
++ND G++RKS S+ + A
Sbjct: 218 WKNDEGTLRKSPSLTSLNA 236
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 28 EYTFYFVYFETQKMAKNYVTNFRG 99
EY+ VYF Q+ N++ G
Sbjct: 199 EYSMLLVYFHLQRHMGNFLIQVYG 222
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 106 NFHHEN*SRNFWPFSVFRNTQN 41
N + E +R+F PFS+ R++Q+
Sbjct: 288 NENSEAAARSFVPFSIERSSQS 309
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 25 REYTFYFVYFETQKMAKNYVTNFRGESFFTPNAKMNIKD 141
RE+ F+ +M N +TNF+ + F K +++D
Sbjct: 144 REFMQKIWPFKEYQMNGNNITNFKNSNIF--QLKQHMRD 180
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,465
Number of Sequences: 438
Number of extensions: 3258
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -